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contig_metadata

6 rows where bioproject = "PRJNA1166865" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA1166865 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5416656 5416656 PRJNA1166865_P_NODE_70565_length_261_cov_1.601064_g70324_i0 PRJNA1166865 70565 261 1.601064 4.17877704 Potyvirus sacchari 3240610 Viruses Viruses 52.8 0.024   NTclustered gi|1766756986|gb|MK684196.1| 12224 g70324 i0 100 0.10727969348659 28 0 11 0 209 236 622 595 Sugarcane mosaic virus isolate RwS17_002 polyprotein gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
6142406 6142406 PRJNA1166865_P_NODE_2085_length_1263_cov_6.807563_g1991_i0 PRJNA1166865 2085 1263 6.807563 85.97952069 Orthorubulavirus 2560195 Viruses Viruses 2314 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1991 i0 99.762 84.507521773555 1263 1 100 1 1 1263 1776 3036 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 106733 2327 0.994413407821229 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
7417542 7417542 PRJNA1166865_P_NODE_886_length_1631_cov_6.725289_g829_i0 PRJNA1166865 886 1631 6.725289 109.68946359 Orthorubulavirus 2560195 Viruses Viruses 2979 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g829 i0 99.632 76.4794604537094 1631 6 100 0 1 1631 2 1632 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 124738 2985 0.997989949748744 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
11242846 11242846 PRJNA1166865_P_NODE_2729_length_1148_cov_5.747907_g2618_i0 PRJNA1166865 2729 1148 5.747907 65.98597236 Paramyxoviridae 11158 Viruses Viruses 2104 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g2618 i0 99.739 68.9477351916376 1148 3 100 0 1 1148 2057 3204 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 79152 2115 0.994799054373522 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
21441593 21441593 PRJNA1166865_P_NODE_737_length_1714_cov_4.862279_g690_i0 PRJNA1166865 737 1714 4.862279 83.33946206 Orthorubulavirus 2560195 Viruses Viruses 3155 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g690 i0 99.883 97.0933488914819 1714 2 100 0 1 1714 6203 4490 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 166418 3155 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
26945416 26945416 PRJNA1166865_P_NODE_61582_length_282_cov_1.392344_g61341_i0 PRJNA1166865 61582 282 1.392344 3.92641008 African cichlid piscichuvirus 3065075 Viruses Viruses 82 9.73e-16   NR WLN26256.1 3065075 g61341 i0 45.3 1.01063829787234 95 50 98.9 1 279 1 117 211 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 285 82 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;