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contig_metadata

19 rows where bioproject = "PRJNA1166865" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 19 ✖

bioproject 1

  • PRJNA1166865 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
313603 313603 PRJNA1166865_P_NODE_70241_length_262_cov_1.222222_g70000_i0 PRJNA1166865 70241 262 1.222222 3.20222164 Halomarina litorea 2961595 Archaea Archaea 52.8 0.024   NTclustered gi|2270268913|gb|CP100449.1| 2961595 g70000 i0 100 0.106870229007634 28 0 11 0 5 32 322237 322210 Halomarina litorea strain BCD28 plasmid unnamed1, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina litorea
6142488 6142488 PRJNA1166865_P_NODE_66345_length_271_cov_1.555556_g66104_i0 PRJNA1166865 66345 271 1.555556 4.21555676 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|2273673090|gb|CP101323.1| 1046043 g66104 i0 100 0.214022140221402 29 0 11 0 185 213 2046412 2046384 Natronomonas gomsonensis strain KCTC 4088 chromosome, complete genome blastn 58 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas gomsonensis
7417504 7417504 PRJNA1166865_P_NODE_62206_length_280_cov_2.917874_g61965_i0 PRJNA1166865 62206 280 2.917874 8.1700472 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|1526250537|gb|CP034145.1| 660522 g61965 i0 100 0.325 29 0 10 0 247 275 2763493 2763521 Haloplanus aerogenes strain JCM 16430 chromosome, complete genome blastn 91 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus aerogenes
7966396 7966396 PRJNA1166865_P_NODE_51467_length_308_cov_0.982979_g51226_i0 PRJNA1166865 51467 308 0.982979 3.02757532 Halomontanus rarus 3034020 Archaea Archaea 67.6 1.03e-6   NTclustered gi|2463595547|gb|CP119796.1| 3034020 g51226 i0 97.436 1.41883116883117 39 1 13 0 11 49 77399 77361 Halomontanus rarus strain TS33 chromosome, complete genome blastn 437 67.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halomontanus Halomontanus rarus
11791897 11791897 PRJNA1166865_P_NODE_58650_length_289_cov_1.111111_g58409_i0 PRJNA1166865 58650 289 1.111111 3.21111079 Salinigranum marinum 1515595 Archaea Archaea 54.7 0.007   NTclustered gi|2270305257|gb|CP100461.1| 1515595 g58409 i0 100 0.100346020761246 29 0 10 0 192 220 1318993 1319021 Salinigranum marinum strain ZS-10 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinigranum Salinigranum marinum
18165629 18165629 PRJNA1166865_P_NODE_89595_length_244_cov_0.900585_g89354_i0 PRJNA1166865 89595 244 0.900585 2.1974274 Halovivax limisalsi 1453760 Archaea Archaea 53.5 4.1e-6   NR WP_247730022.1 1453760 g89354 i0 44.2 0.639344262295082 52 27 63.9 1 2 157 172 221 WP_247730022.1 class I SAM-dependent methyltransferase [Halovivax limisalsi] diamond 156 53.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovivax Halovivax limisalsi
20715385 20715385 PRJNA1166865_P_NODE_91757_length_242_cov_1.822485_g91516_i0 PRJNA1166865 91757 242 1.822485 4.4104137 Halobacterium sp. DL1 751944 Archaea Archaea 52.8 0.022   NTclustered gi|573484043|gb|CP007060.1| 751944 g91516 i0 94.286 0.144628099173554 35 1 14 1 94 128 2119237 2119204 Halobacterium sp. DL1, complete genome blastn 35 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. DL1
26913784 26913784 PRJNA1166865_P_NODE_27242_length_412_cov_1.362832_g27001_i0 PRJNA1166865 27242 412 1.362832 5.61486784 Haladaptatus litoreus 553468 Archaea Archaea 79.7 2.7e-14   NR WP_076429576.1 553468 g27001 i0 32.4 1.98058252427184 136 90 97.6 1 6 407 49 184 WP_076429576.1 DUF4397 domain-containing protein [Haladaptatus litoreus] diamond 816 79.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus litoreus
27261824 27261824 PRJNA1166865_P_NODE_51123_length_309_cov_0.927966_g50882_i0 PRJNA1166865 51123 309 0.927966 2.86741494 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 2.55e-5   NR MDD4307948.1 1906666 g50882 i0 35.7 0.679611650485437 70 41 68 1 282 73 494 559 MDD4307948.1 cadherin-like beta sandwich domain-containing protein [Thermoplasmata archaeon] diamond 210 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27281086 27281086 PRJNA1166865_P_NODE_90703_length_243_cov_0.905882_g90462_i0 PRJNA1166865 90703 243 0.905882 2.20129326 Methanobacteriati 3366610 Archaea Archaea 50.8 5.24e-5   NR RZD38844.1 2026739 g90462 i0 44.2 2.03703703703704 52 26 64.2 1 222 67 416 464 RZD38844.1 MAG: hypothetical protein CXT75_00155 [Methanobacteriota archaeon] diamond 495 51.2 0.9921875 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27470669 27470669 PRJNA1166865_P_NODE_83463_length_247_cov_0.885057_g83222_i0 PRJNA1166865 83463 247 0.885057 2.18609079 Methanospirillum 2202 Archaea Archaea 51.2 4.02e-5   NR WP_319540101.1 262503 g83222 i0 39.7 2.91497975708502 63 38 76.5 0 58 246 21 83 WP_319540101.1 chemotaxis protein CheC [uncultured Methanospirillum sp.] diamond 720 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum uncultured Methanospirillum sp.
28638973 28638973 PRJNA1166865_P_NODE_50027_length_312_cov_1.188285_g49786_i0 PRJNA1166865 50027 312 1.188285 3.7074492 Methanobacteriaceae 2159 Archaea Archaea 57.8 4.45e-7   NR WP_407432022.1 66852 g49786 i0 48.4 3.08653846153846 62 31 58.7 1 69 251 689 750 WP_407432022.1 hypothetical protein [Methanobrevibacter sp.] diamond 963 57.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28796450 28796450 PRJNA1166865_P_NODE_84527_length_246_cov_1.086705_g84286_i0 PRJNA1166865 84527 246 1.086705 2.6732943 root 1 Root_unresolved Root_unresolved 57.8 1.95e-7   NR WP_292395620.1 1915497 g84286 i0 49 2.53658536585366 51 26 62.2 0 38 190 463 513 WP_292395620.1 kelch repeat-containing protein [Methanoculleus sp. UBA303] diamond 624 57.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp. UBA303
29471741 29471741 PRJNA1166865_P_NODE_74150_length_253_cov_1.227778_g73909_i0 PRJNA1166865 74150 253 1.227778 3.10627834 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 48.1 2.72e-4   NR HIF04094.1 2163009 g73909 i0 60.6 1.28063241106719 33 13 39.1 0 54 152 93 125 HIF04094.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 324 48.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
29554243 29554243 PRJNA1166865_P_NODE_92570_length_242_cov_0.911243_g92329_i0 PRJNA1166865 92570 242 0.911243 2.20520806 Archaea 2157 Archaea Archaea 58.2 2.38e-8   NR MBO8181241.1 1872626 g92329 i0 44.9 2.4297520661157 49 27 60.7 0 240 94 99 147 MBO8181241.1 alanyl-tRNA editing protein [Archaeoglobus sp.] diamond 588 58.2 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus Archaeoglobus sp.
29787613 29787613 PRJNA1166865_P_NODE_72511_length_256_cov_2.459016_g72270_i0 PRJNA1166865 72511 256 2.459016 6.29508096 Methanosarcina sp. Ant1 1882735 Archaea Archaea 63.5 5.64e-10   NR OEU41317.1 1882735 g72270 i0 48 0.87890625 75 34 84.4 3 240 25 57 129 OEU41317.1 hypothetical protein BGV40_15580 [Methanosarcina sp. Ant1] diamond 225 63.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. Ant1
30830304 30830304 PRJNA1166865_P_NODE_28734_length_401_cov_2.387195_g28493_i0 PRJNA1166865 28734 401 2.387195 9.57265195 Haladaptatus caseinilyticus 2993314 Archaea Archaea 67.4 4.83e-10   NR WP_266077698.1 2993314 g28493 i0 33.3 1.43640897755611 96 63 71.8 1 323 36 123 217 WP_266077698.1 DUF4397 domain-containing protein [Haladaptatus caseinilyticus] diamond 576 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus caseinilyticus
30988490 30988490 PRJNA1166865_P_NODE_88874_length_244_cov_0.900585_g88633_i0 PRJNA1166865 88874 244 0.900585 2.1974274 candidate division MSBL1 archaeon SCGC-AAA259A 215777 Archaea Archaea 46.6 0.00162   NR KXA91433.1 1698259 g88633 i0 30.7 0.922131147540984 75 40 83.6 2 230 27 277 346 KXA91433.1 hypothetical protein AKJ57_01350 [candidate division MSBL1 archaeon SCGC-AAA259A05] diamond 225 46.6 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA259A05
31209055 31209055 PRJNA1166865_P_NODE_40895_length_341_cov_1.652985_g40654_i0 PRJNA1166865 40895 341 1.652985 5.63667885 Candidatus Alkanophaga volatiphilum 2971472 Archaea Archaea 76.3 4.66e-14   NR MDF2957374.1 2971472 g40654 i0 41.9 2.25219941348974 86 46 75.7 1 341 84 47 128 MDF2957374.1 Regulator of protease activity HflC [Candidatus Alkanophaga volatiphilum] diamond 768 76.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Alkanophagales   Candidatus Alkanophaga Candidatus Alkanophaga volatiphilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;