RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1166865", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1166865 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27439270 27439270 PRJNA1166865_P_NODE_94263_length_241_cov_0.916667_g94022_i0 PRJNA1166865 94263 241 0.916667 2.20916747 Opisthokonta 33154 Fungi Fungi 82 8.47e-17   NR EQB61837.1 1037528 g94022 i0 53.3 2.86307053941909 75 35 93.4 0 225 1 80 154 EQB61837.1 atp-dependent rna helicase dbp2 [Vairimorpha apis BRL 01] diamond 690 82.8 0.990338164251208 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha apis
29219595 29219595 PRJNA1166865_P_NODE_64949_length_274_cov_2.109453_g64708_i0 PRJNA1166865 64949 274 2.109453 5.77990122 Nematocida ausubeli 1913371 Fungi Fungi 42.7 0.0394   NR KAI5163270.1 1913371 g64708 i0 69.7 0.361313868613139 33 10 36.1 0 155 57 66 98 KAI5163270.1 hypothetical protein NEAUS03_2266 [Nematocida ausubeli] diamond 99 42.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida ausubeli
30767201 30767201 PRJNA1166865_P_NODE_66114_length_272_cov_1.120603_g65873_i0 PRJNA1166865 66114 272 1.120603 3.04804016 Vairimorpha necatrix 6039 Fungi Fungi 70.1 7.51e-12   NR XP_065328743.1 6039 g65873 i0 46.3 7.76470588235294 80 42 88.2 1 31 270 34 112 XP_065328743.1 aldose reductase [Vairimorpha necatrix] diamond 2112 70.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
31051824 31051824 PRJNA1166865_P_NODE_88095_length_244_cov_1.654971_g87854_i0 PRJNA1166865 88095 244 1.654971 4.03812924 Hepatospora eriocheir 1081669 Fungi Fungi 42.4 0.0387   NR ORD99910.1 1081669 g87854 i0 41.5 1.30327868852459 53 29 65.2 1 80 238 9 59 ORD99910.1 YIF1 [Hepatospora eriocheir] diamond 318 42.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Hepatosporidae Hepatospora Hepatospora eriocheir

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;