contig_metadata
7 rows where bioproject = "PRJNA1166865", tax_clade = "Metamonada" and tax_phylum = "Fornicata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4140544 | 4140544 | PRJNA1166865_P_NODE_76044_length_251_cov_0.865169_g75803_i0 | PRJNA1166865 | 76044 | 251 | 0.865169 | 2.17157419 | Giardia duodenalis | 5741 | Fornicata | other_Eukaryota | 58.4 | 4.89e-4 | NTclustered | gi|159116248|ref|XM_001708294.1| | 5741 | g75803 | i0 | 97.059 | 0.135458167330677 | 34 | 1 | 14 | 0 | 122 | 155 | 267 | 234 | Giardia intestinalis Coiled-coil protein (GL50803_0017574), partial mRNA | blastn | 34 | 58.4 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis | |||
| 5415687 | 5415687 | PRJNA1166865_P_NODE_31965_length_382_cov_0.996764_g31724_i0 | PRJNA1166865 | 31965 | 382 | 0.996764 | 3.80763848 | Carpediemonas membranifera | 201153 | Fornicata | other_Eukaryota | 385 | 3.16e-102 | NTclustered | gi|339759363|dbj|AB600294.1| | 201153 | g31724 | i0 | 89.701 | 76.5523560209424 | 301 | 31 | 79 | 0 | 82 | 382 | 1 | 301 | Carpediemonas membranifera gene for alpha-tubulin, partial cds, strain: BICM | blastn | 29243 | 385 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 11791395 | 11791395 | PRJNA1166865_P_NODE_38750_length_349_cov_2.057971_g38509_i0 | PRJNA1166865 | 38750 | 349 | 2.057971 | 7.18231879 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 169 | 4.02e-51 | NR | GCA63272.1 | 797122 | g38509 | i0 | 73.3 | 5.98280802292264 | 116 | 30 | 99.7 | 1 | 348 | 1 | 33 | 147 | GCA63272.1 ribosomal protein S17, archaeal/eukaryotic [Kipferlia bialata] | diamond | 2088 | 169 | 1 | Eukaryota | Metamonada | Fornicata | Kipferlia | Kipferlia bialata | |||||
| 15616692 | 15616692 | PRJNA1166865_P_NODE_84513_length_246_cov_1.150289_g84272_i0 | PRJNA1166865 | 84513 | 246 | 1.150289 | 2.82971094 | Hexamita inflata | 28002 | Fornicata | other_Eukaryota | 88.6 | 1.59e-19 | NR | CAK8772115.1 | 28002 | g84272 | i0 | 55.6 | 1.98780487804878 | 81 | 32 | 98.8 | 1 | 4 | 246 | 28 | 104 | CAK8772115.1 HINF_014353 [Hexamita inflata] | diamond | 489 | 88.6 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Hexamita | Hexamita inflata | |||
| 29945827 | 29945827 | PRJNA1166865_P_NODE_94071_length_241_cov_0.916667_g93830_i0 | PRJNA1166865 | 94071 | 241 | 0.916667 | 2.20916747 | Aduncisulcus paluster | 2918883 | Fornicata | other_Eukaryota | 66.2 | 1.98e-10 | NR | GKT26470.1 | 2918883 | g93830 | i0 | 56.9 | 0.634854771784232 | 51 | 22 | 63.5 | 0 | 237 | 85 | 2010 | 2060 | GKT26470.1 conserved unknown protein, partial [Aduncisulcus paluster] | diamond | 153 | 66.2 | 1 | Eukaryota | Metamonada | Fornicata | Aduncisulcus | Aduncisulcus paluster | |||||
| 30672252 | 30672252 | PRJNA1166865_P_NODE_39013_length_348_cov_1.869091_g38772_i0 | PRJNA1166865 | 39013 | 348 | 1.869091 | 6.50443668 | Hexamita inflata | 28002 | Fornicata | other_Eukaryota | 51.6 | 9.58e-5 | NR | CAK8747405.1 | 28002 | g38772 | i0 | 31.1 | 0.913793103448276 | 106 | 66 | 85.3 | 1 | 344 | 48 | 626 | 731 | CAK8747405.1 HINF_098669 [Hexamita inflata] | diamond | 318 | 51.6 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Hexamita | Hexamita inflata | |||
| 31399440 | 31399440 | PRJNA1166865_P_NODE_17576_length_511_cov_2.589041_g17335_i0 | PRJNA1166865 | 17576 | 511 | 2.589041 | 13.22999951 | Giardia intestinalis | 5741 | Fornicata | other_Eukaryota | 52.8 | 1.69e-4 | NR | XP_001709824.1 | 5741 | g17335 | i0 | 27.3 | 1.13894324853229 | 194 | 80 | 99.8 | 9 | 2 | 511 | 316 | 472 | XP_001709824.1 VSP with INR [Giardia intestinalis] | diamond | 582 | 52.8 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;