RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1166865", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21990375 21990375 PRJNA1166865_P_NODE_75718_length_251_cov_0.865169_g75477_i0 PRJNA1166865 75718 251 0.865169 2.17157419 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 92.8 7.15e-20   NR MBN1128908.1 2813024 g75477 i0 54 2.05577689243028 87 35 99.2 3 3 251 254 339 MBN1128908.1 cellulase family glycosylhydrolase [Chitinispirillaceae bacterium] diamond 516 92.8 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
29566644 29566644 PRJNA1166865_P_NODE_19450_length_487_cov_1.444444_g19209_i0 PRJNA1166865 19450 487 1.444444 7.03444228 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 160 3.31e-45   NR MBD3419113.1 2663014 g19209 i0 51 2.77207392197125 153 73 93 1 485 33 143 295 MBD3419113.1 phospholipase [Chitinivibrionales bacterium] diamond 1350 160 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;