contig_metadata
4 rows where bioproject = "PRJNA1166865", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19439991 | 19439991 | PRJNA1166865_P_NODE_91096_length_243_cov_0.905882_g90855_i0 | PRJNA1166865 | 91096 | 243 | 0.905882 | 2.20129326 | Chlorobiaceae | 191412 | Bacteria | Bacteria | 121 | 6.68e-30 | NR | WP_012466267.1 | 1092 | g90855 | i0 | 68.3 | 5.06172839506173 | 82 | 25 | 100 | 1 | 1 | 243 | 347 | 428 | WP_012466267.1 phosphoketolase [Chlorobium limicola] | diamond | 1230 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium limicola | |
| 24539529 | 24539529 | PRJNA1166865_P_NODE_70920_length_260_cov_1.647059_g70679_i0 | PRJNA1166865 | 70920 | 260 | 1.647059 | 4.2823534 | root | 1 | Root_unresolved | Root_unresolved | 91.7 | 2.24e-19 | NR | MEI6691626.1 | 1095 | g70679 | i0 | 48.3 | 14.4692307692308 | 87 | 44 | 99.2 | 1 | 3 | 260 | 92 | 178 | MEI6691626.1 aldehyde dehydrogenase family protein [Chlorobium sp.] | diamond | 3762 | 92.4 | 0.992424242424242 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium sp. | |
| 27767281 | 27767281 | PRJNA1166865_P_NODE_83204_length_247_cov_0.885057_g82963_i0 | PRJNA1166865 | 83204 | 247 | 0.885057 | 2.18609079 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 65.9 | 2.54e-10 | NR | MCI0448925.1 | 2268192 | g82963 | i0 | 36.5 | 5.85425101214575 | 74 | 44 | 89.9 | 1 | 11 | 232 | 10 | 80 | MCI0448925.1 NAD(P)H-dependent oxidoreductase [Chlorobiota bacterium] | diamond | 1446 | 65.9 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 29188106 | 29188106 | PRJNA1166865_P_NODE_75769_length_251_cov_0.865169_g75528_i0 | PRJNA1166865 | 75769 | 251 | 0.865169 | 2.17157419 | Chlorobium sp. KB | 1095 | Bacteria | Bacteria | 63.5 | 1.93e-9 | NR | WP_076790820.1 | 1917528 | g75528 | i0 | 51.5 | 1.57768924302789 | 66 | 31 | 78.9 | 1 | 49 | 246 | 397 | 461 | WP_076790820.1 PAS domain S-box protein [Chlorobium sp. KB01] | diamond | 396 | 63.5 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium sp. KB01 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;