RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1166865", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27388333 27388333 PRJNA1166865_P_NODE_70623_length_261_cov_1.319149_g70382_i0 PRJNA1166865 70623 261 1.319149 3.44297889 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 58.9 3.3e-8   NR MCH8333837.1 2107588 g70382 i0 55.8 0.494252873563218 43 19 49.4 0 128 256 112 154 MCH8333837.1 phosphoadenosine phosphosulfate reductase family protein [Candidatus Sumerlaeota bacterium] diamond 129 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
27609276 27609276 PRJNA1166865_P_NODE_34284_length_370_cov_0.919192_g34043_i0 PRJNA1166865 34284 370 0.919192 3.4010104 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 152 7.67e-42   NR AXA35161.1 2250252 g34043 i0 55.3 1.99459459459459 123 55 99.7 0 370 2 120 242 AXA35161.1 Translation elongation factor Tu [Candidatus Sumerlaea chitinivorans] diamond 738 152 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;