RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1166865", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29787588 29787588 PRJNA1166865_P_NODE_32971_length_376_cov_2.029703_g32730_i0 PRJNA1166865 32971 376 2.029703 7.63168328 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 62.8 2.14e-9   NR MEN9613892.1 2762014 g32730 i0 47.5 0.470744680851064 59 31 47.1 0 374 198 97 155 MEN9613892.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 177 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29882730 29882730 PRJNA1166865_P_NODE_57751_length_291_cov_1.059633_g57510_i0 PRJNA1166865 57751 291 1.059633 3.08353203 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 41.2 0.0165   NR RMD59166.1 2762014 g57510 i0 61.3 0.319587628865979 31 12 32 0 118 26 4 34 RMD59166.1 MAG: RNA-binding protein, partial [Candidatus Parcubacteria bacterium] diamond 93 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;