RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1166865", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1166865 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18165523 18165523 PRJNA1166865_P_NODE_84755_length_246_cov_0.890173_g84514_i0 PRJNA1166865 84755 246 0.890173 2.18982558 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 89.4 1.92e-20   NR HXR36565.1 2785449 g84514 i0 72.7 2.68292682926829 55 15 67.1 0 2 166 98 152 HXR36565.1 VOC family protein [Candidatus Binataceae bacterium] diamond 660 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
29617230 29617230 PRJNA1166865_P_NODE_42990_length_334_cov_1.180077_g42749_i0 PRJNA1166865 42990 334 1.180077 3.94145718 Pseudomonadati 3379134 Bacteria Bacteria 103 5.56e-24   NR HVN89354.1 2785449 g42749 i0 53.2 4.95808383233533 111 48 98.8 2 3 332 100 207 HVN89354.1 NAD(P)-dependent oxidoreductase [Candidatus Binataceae bacterium] diamond 1656 103 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
29692745 29692745 PRJNA1166865_P_NODE_94650_length_241_cov_0.916667_g94409_i0 PRJNA1166865 94650 241 0.916667 2.20916747 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 87.4 5.71e-18   NR GIW41541.1 2838779 g94409 i0 50 3.87136929460581 78 39 97.1 0 6 239 331 408 GIW41541.1 MAG: succinyl-diaminopimelate desuccinylase [Candidatus Binatia bacterium] diamond 933 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;