RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1166865", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26616483 26616483 PRJNA1166865_P_NODE_74261_length_252_cov_1.966480_g74020_i0 PRJNA1166865 74261 252 1.96648 4.9555296 Bacteria 2 Bacteria Bacteria 79 7.57e-15   NR MDH4198112.1 2052149 g74020 i0 55.1 1.6547619047619 69 30 82.1 1 252 46 538 605 MDH4198112.1 transketolase [Candidatus Aminicenantes bacterium] diamond 417 79 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29282388 29282388 PRJNA1166865_P_NODE_37169_length_356_cov_1.632509_g36928_i0 PRJNA1166865 37169 356 1.632509 5.81173204 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 50.4 2.54e-4   NR UCH98084.1 2052149 g36928 i0 46.2 0.438202247191011 52 26 43.8 1 189 344 259 308 UCH98084.1 MAG: hypothetical protein JSV88_14860, partial [Candidatus Aminicenantes bacterium] diamond 156 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;