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contig_metadata

25 rows where bioproject = "PRJNA1164198" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
311969 311969 PRJNA1164198_P_NODE_19281_length_282_cov_1.550239_g19012_i0 PRJNA1164198 19281 282 1.550239 4.37167398 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 291 5.06e-74   NTclustered gi|698815387|ref|XM_009842421.1| 112090 g19012 i0 88.382 81.2943262411348 241 28 85 0 2 242 304 64 Aphanomyces astaci actin mRNA blastn 22925 291 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
1039476 1039476 PRJNA1164198_P_NODE_12761_length_347_cov_1.266423_g12492_i0 PRJNA1164198 12761 347 1.266423 4.39448781 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 175 4.84e-48   NR CCI45297.1 65357 g12492 i0 66.4 14.4121037463977 113 38 97.7 0 2 340 366 478 CCI45297.1 unnamed protein product [Albugo candida] diamond 5001 176 0.994318181818182 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
3589978 3589978 PRJNA1164198_P_NODE_23523_length_256_cov_1.278689_g23254_i0 PRJNA1164198 23523 256 1.278689 3.27344384 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 195 3.65e-45   NTclustered gi|166040017|emb|CU350235.1| 100861 g23254 i0 82.379 82.76171875 227 36 88 4 32 256 395 171 Aphanomyces euteiches cDNA blastn 21187 196 0.994897959183674 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
6689898 6689898 PRJNA1164198_P_NODE_23146_length_258_cov_1.486486_g22877_i0 PRJNA1164198 23146 258 1.486486 3.83513388 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 171 6.21e-38   NTclustered gi|1378148413|ref|XM_024722856.1| 4781 g22877 i0 82.979 43.4883720930233 188 32 73 0 60 247 188 1 Plasmopara halstedii 60s ribosomal protein l27a (PHALS_05303), partial mRNA blastn 11220 171 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
6689959 6689959 PRJNA1164198_P_NODE_8166_length_437_cov_1.376374_g7904_i0 PRJNA1164198 8166 437 1.376374 6.01475438 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.08e-15   NR DBA03679.1 4803 g7904 i0 59.1 2.33409610983982 66 27 45.3 0 39 236 1 66 DBA03679.1 TPA: hypothetical protein N0F65_004096 [Lagenidium giganteum] diamond 1020 78.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
7965197 7965197 PRJNA1164198_P_NODE_19927_length_278_cov_0.926829_g19658_i0 PRJNA1164198 19927 278 0.926829 2.57658462 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 209 1.43e-49   NTclustered gi|813114452|ref|XM_012339991.1| 695850 g19658 i0 81.061 15.9388489208633 264 48 95 2 14 276 484 222 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 4431 209 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
7965217 7965217 PRJNA1164198_P_NODE_24047_length_253_cov_1.300000_g23778_i0 PRJNA1164198 24047 253 1.3 3.289 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 3.6499999999999998e-25   NR CCI44493.1 65357 g23778 i0 72.9 3.49802371541502 70 19 83 0 4 213 312 381 CCI44493.1 unnamed protein product [Albugo candida] diamond 885 106 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
10515562 10515562 PRJNA1164198_P_NODE_10269_length_388_cov_1.438095_g10002_i0 PRJNA1164198 10269 388 1.438095 5.5798086 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 204 9.67e-48   NTclustered gi|813111021|ref|XM_012339685.1| 695850 g10002 i0 76.425 32.8350515463918 386 86 99 5 3 386 514 132 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 12740 204 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
10515660 10515660 PRJNA1164198_P_NODE_30209_length_243_cov_0.917647_g29940_i0 PRJNA1164198 30209 243 0.917647 2.22988221 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 100 1.4000000000000002e-22   NR XP_024577070.1 4781 g29940 i0 62 6.71604938271605 79 28 95.1 1 9 239 187 265 XP_024577070.1 ras-like protein [Plasmopara halstedii] diamond 1632 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
16342017 16342017 PRJNA1164198_P_NODE_28013_length_246_cov_3.797688_g27744_i0 PRJNA1164198 28013 246 3.797688 9.34231248 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 235 2.06e-57   NTclustered gi|1103652769|gb|AF085345.2| 82926 g27744 i0 84.914 91.630081300813 232 35 94 0 1 232 270 39 Pythium splendens actin mRNA, complete cds blastn 22541 237 0.991561181434599 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
26679670 26679670 PRJNA1164198_P_NODE_28421_length_246_cov_0.901734_g28152_i0 PRJNA1164198 28421 246 0.901734 2.21826564 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 131 2.1e-33   NR XP_067815200.1 4779 g28152 i0 75.3 8.89024390243902 81 20 98.8 0 3 245 289 369 XP_067815200.1 hypothetical protein CCR75_009252 [Bremia lactucae] diamond 2187 131 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
26977105 26977105 PRJNA1164198_P_NODE_25002_length_252_cov_0.871508_g24733_i0 PRJNA1164198 25002 252 0.871508 2.19620016 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.92e-4   NR KAF0733465.1 100861 g24733 i0 50 1.78571428571429 32 16 38.1 0 241 146 33 64 KAF0733465.1 hypothetical protein Ae201684_009709 [Aphanomyces euteiches] diamond 450 49.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27628620 27628620 PRJNA1164198_P_NODE_24184_length_253_cov_0.866667_g23915_i0 PRJNA1164198 24184 253 0.866667 2.19266751 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 73.9 4.52e-13   NR KAF1333497.1 82926 g23915 i0 48.2 6.88932806324111 83 43 98.4 0 250 2 839 921 KAF1333497.1 Multidrug resistance-associated protein 1, partial [Globisporangium splendens] diamond 1743 74.3 0.994616419919246 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28544278 28544278 PRJNA1164198_P_NODE_14247_length_328_cov_1.160784_g13978_i0 PRJNA1164198 14247 328 1.160784 3.80737152 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 180 2.3899999999999998e-54   NR CCA19147.1 890382 g13978 i0 76.9 5.70731707317073 104 24 95.1 0 17 328 1 104 CCA19147.1 40S ribosomal protein S4 putative [Albugo laibachii Nc14] diamond 1872 181 0.994475138121547 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
28607195 28607195 PRJNA1164198_P_NODE_30707_length_242_cov_0.923077_g30438_i0 PRJNA1164198 30707 242 0.923077 2.23384634 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 132 2.4899999999999996e-35   NR OQS04692.1 74557 g30438 i0 82.5 6.91735537190083 80 14 99.2 0 241 2 6 85 OQS04692.1 aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata] diamond 1674 132 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28891179 28891179 PRJNA1164198_P_NODE_29748_length_244_cov_0.912281_g29479_i0 PRJNA1164198 29748 244 0.912281 2.22596564 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 109 1.24e-25   NR OQR89707.1 74557 g29479 i0 65 5.9016393442623 80 28 98.4 0 3 242 176 255 OQR89707.1 60S acidic ribosomal protein P0, partial [Thraustotheca clavata] diamond 1440 110 0.990909090909091 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29914282 29914282 PRJNA1164198_P_NODE_30251_length_243_cov_0.917647_g29982_i0 PRJNA1164198 30251 243 0.917647 2.22988221 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 66.6 1.46e-10   NR DBA04010.1 4803 g29982 i0 43.7 0.876543209876543 71 39 87.7 1 7 219 217 286 DBA04010.1 TPA: hypothetical protein N0F65_009357 [Lagenidium giganteum] diamond 213 66.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30230026 30230026 PRJNA1164198_P_NODE_8832_length_419_cov_3.355491_g8570_i0 PRJNA1164198 8832 419 3.355491 14.05950729 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 128 1.19e-33   NR KAJ8578052.1 4785 g8570 i0 54.6 3.87350835322196 130 53 89.5 4 17 391 117 245 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 1623 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30609053 30609053 PRJNA1164198_P_NODE_27793_length_247_cov_0.896552_g27524_i0 PRJNA1164198 27793 247 0.896552 2.21448344 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.34e-4   NR XP_067820148.1 4779 g27524 i0 32.9 2.55060728744939 70 47 85 0 240 31 5 74 XP_067820148.1 hypothetical protein CCR75_007162 [Bremia lactucae] diamond 630 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
31133684 31133684 PRJNA1164198_P_NODE_29555_length_244_cov_0.912281_g29286_i0 PRJNA1164198 29555 244 0.912281 2.22596564 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 101 1.7599999999999994e-23   NR DBA03690.1 4803 g29286 i0 67.6 1.7827868852459 71 23 87.3 0 215 3 220 290 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 435 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31513682 31513682 PRJNA1164198_P_NODE_18316_length_289_cov_1.958333_g18047_i0 PRJNA1164198 18316 289 1.958333 5.65958237 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 144 5.5799999999999996e-42   NR KAF0727766.1 100861 g18047 i0 80.2 39.0934256055363 81 16 84.1 0 288 46 3 83 KAF0727766.1 hypothetical protein Ae201684_014280 [Aphanomyces euteiches] diamond 11298 144 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31639887 31639887 PRJNA1164198_P_NODE_14496_length_325_cov_1.238095_g14227_i0 PRJNA1164198 14496 325 1.238095 4.02380875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 3.12e-25   NR OQR82037.1 74557 g14227 i0 56.2 1.60615384615385 89 39 82.2 0 268 2 13 101 OQR82037.1 leucyl-tRNA synthetase, cytoplasmic [Thraustotheca clavata] diamond 522 110 0.990909090909091 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32285385 32285385 PRJNA1164198_P_NODE_19179_length_283_cov_1.333333_g18910_i0 PRJNA1164198 19179 283 1.333333 3.77333239 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 55.8 1.52e-6   NR CCA24294.1 890382 g18910 i0 70.6 0.360424028268551 34 9 36 1 108 7 704 736 CCA24294.1 PREDICTED: DNA topoisomerase 3beta1like isoform 1 putative [Albugo laibachii Nc14] diamond 102 55.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
32557733 32557733 PRJNA1164198_P_NODE_16419_length_305_cov_1.728448_g16150_i0 PRJNA1164198 16419 305 1.728448 5.2717664 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 127 1.78e-31   NR KAJ0412157.1 114742 g16150 i0 65.6 6.30491803278689 93 29 91.5 2 9 287 620 709 KAJ0412157.1 hypothetical protein ATCC90586_005770 [Pythium insidiosum] diamond 1923 128 0.9921875 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32746473 32746473 PRJNA1164198_P_NODE_25480_length_251_cov_0.876404_g25211_i0 PRJNA1164198 25480 251 0.876404 2.19977404 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 105 1.29e-24   NR DBA03688.1 4803 g25211 i0 54.2 8.90438247011952 83 38 99.2 0 250 2 65 147 DBA03688.1 TPA: hypothetical protein N0F65_004105 [Lagenidium giganteum] diamond 2235 105 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;