RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1164198" and tax_phylum = "Kiritimatiellota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1164198 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2862868 2862868 PRJNA1164198_P_NODE_31643_length_229_cov_3.166667_g31374_i0 PRJNA1164198 31643 229 3.166667 7.25166743 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 145 3.28e-30   NTclustered gi|827038732|gb|CP010904.1| 1307763 g31374 i0 82.249 0.737991266375546 169 29 73 1 1 168 588717 588549 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 169 145 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
31462750 31462750 PRJNA1164198_P_NODE_26416_length_249_cov_0.886364_g26147_i0 PRJNA1164198 26416 249 0.886364 2.20704636 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 42.7 0.038   NR MCB1071097.1 2212473 g26147 i0 29.9 0.927710843373494 77 52 91.6 2 9 236 212 287 MCB1071097.1 ABC transporter permease [Kiritimatiellia bacterium] diamond 231 42.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;