contig_metadata
15 rows where bioproject = "PRJNA1164198" and tax_phylum = "Chloroflexota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4138797 | 4138797 | PRJNA1164198_P_NODE_19304_length_282_cov_1.483254_g19035_i0 | PRJNA1164198 | 19304 | 282 | 1.483254 | 4.18277628 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 324 | 4.99e-84 | NTclustered | gi|2874254066|emb|OY970149.1| | 1672391 | g19035 | i0 | 87.857 | 682.255319148936 | 280 | 28 | 98 | 6 | 4 | 279 | 566875 | 566598 | MAG: uncultured Chloroflexia bacterium isolate MFD05747.bin.c.2 genome assembly, chromosome: 1 | blastn | 192396 | 324 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 7417381 | 7417381 | PRJNA1164198_P_NODE_1886_length_896_cov_1.591738_g1708_i0 | PRJNA1164198 | 1886 | 896 | 1.591738 | 14.26197248 | Chloroflexus | 1107 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|470482818|ref|NR_076553.1| | 1108 | g1708 | i0 | 84.635 | 526.6640625 | 794 | 108 | 88 | 14 | 86 | 876 | 432 | 1214 | Chloroflexus aurantiacus strain J-10-fl 23S ribosomal RNA gene, complete sequence | blastn | 471891 | 784 | 0.99234693877551 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus aurantiacus | ||
| 9239853 | 9239853 | PRJNA1164198_P_NODE_15908_length_310_cov_1.780591_g15639_i0 | PRJNA1164198 | 15908 | 310 | 1.780591 | 5.5198321 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 71.3 | 7.99e-8 | NTclustered | gi|2621701384|emb|OY760104.1| | 2026734 | g15639 | i0 | 89.286 | 1.04193548387097 | 56 | 6 | 18 | 0 | 8 | 63 | 2421757 | 2421812 | MAG: Dehalococcoidia bacterium isolate 85321599-0a94-4039-bbde-d148f9b3e6b5 genome assembly, chromosome: 1 | blastn | 323 | 71.3 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 21441476 | 21441476 | PRJNA1164198_P_NODE_3797_length_646_cov_1.996510_g3551_i0 | PRJNA1164198 | 3797 | 646 | 1.99651 | 12.8974546 | Roseiflexus | 120961 | Bacteria | Bacteria | 333 | 2.0500000000000006e-86 | NTclustered | gi|470482403|ref|NR_076530.1| | 120962 | g3551 | i0 | 78.442 | 58.0495356037152 | 552 | 89 | 83 | 26 | 62 | 599 | 1761 | 1226 | Roseiflexus castenholzii strain HLO8 23S ribosomal RNA gene, complete sequence | blastn | 37500 | 335 | 0.994029850746269 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus castenholzii | ||
| 21988671 | 21988671 | PRJNA1164198_P_NODE_12838_length_346_cov_1.135531_g12569_i0 | PRJNA1164198 | 12838 | 346 | 1.135531 | 3.92893726 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 484 | 2.7199999999999994e-132 | NTclustered | gi|2874253812|emb|OY969796.1| | 1672391 | g12569 | i0 | 91.931 | 53.5924855491329 | 347 | 26 | 100 | 2 | 1 | 346 | 3034399 | 3034054 | MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 | blastn | 18543 | 484 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 22716410 | 22716410 | PRJNA1164198_P_NODE_298_length_1918_cov_3.444444_g250_i0 | PRJNA1164198 | 298 | 1918 | 3.444444 | 66.06443592 | Herpetosiphon | 64 | Bacteria | Bacteria | 3109 | 0 | NTclustered | gi|470482680|ref|NR_076546.1| | 65 | g250 | i0 | 95.95 | 84.3149113660063 | 1926 | 61 | 100 | 16 | 1 | 1918 | 18 | 1934 | Herpetosiphon aurantiacus strain DSM 785 23S ribosomal RNA gene, complete sequence | blastn | 161716 | 3114 | 0.998394348105331 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Herpetosiphonales | Herpetosiphonaceae | Herpetosiphon | Herpetosiphon aurantiacus | ||
| 26850763 | 26850763 | PRJNA1164198_P_NODE_27221_length_248_cov_0.891429_g26952_i0 | PRJNA1164198 | 27221 | 248 | 0.891429 | 2.21074392 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 87 | 2.55e-19 | NR | MXY79866.1 | 2026724 | g26952 | i0 | 48.1 | 1.92338709677419 | 79 | 39 | 95.6 | 2 | 245 | 9 | 27 | 103 | MXY79866.1 hypothetical protein [Chloroflexota bacterium] | diamond | 477 | 87 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 26882384 | 26882384 | PRJNA1164198_P_NODE_9681_length_400_cov_0.871560_g9414_i0 | PRJNA1164198 | 9681 | 400 | 0.87156 | 3.48624 | Chloroflexus sp. MS-CIW-1 | 3055768 | Bacteria | Bacteria | 44.3 | 0.0405 | NR | MDN5272374.1 | 3055768 | g9414 | i0 | 28.1 | 0.72 | 96 | 57 | 63 | 2 | 6 | 257 | 60 | 155 | MDN5272374.1 TrkA C-terminal domain-containing protein [Chloroflexus sp. MS-CIW-1] | diamond | 288 | 44.3 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus sp. MS-CIW-1 | ||
| 29314149 | 29314149 | PRJNA1164198_P_NODE_11009_length_375_cov_0.745033_g10741_i0 | PRJNA1164198 | 11009 | 375 | 0.745033 | 2.79387375 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 44.3 | 0.0434 | NR | NMD30575.1 | 2026724 | g10741 | i0 | 35.2 | 0.432 | 54 | 35 | 43.2 | 0 | 325 | 164 | 411 | 464 | NMD30575.1 transporter [Chloroflexota bacterium] | diamond | 162 | 44.3 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 29471708 | 29471708 | PRJNA1164198_P_NODE_6990_length_475_cov_1.430348_g6729_i0 | PRJNA1164198 | 6990 | 475 | 1.430348 | 6.794153 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 73.6 | 8.68e-12 | NR | MCA9992201.1 | 2073117 | g6729 | i0 | 34.6 | 0.966315789473684 | 153 | 94 | 95.4 | 3 | 1 | 453 | 1307 | 1455 | MCA9992201.1 tandem-95 repeat protein [Anaerolineales bacterium] | diamond | 459 | 73.6 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 29692699 | 29692699 | PRJNA1164198_P_NODE_28310_length_246_cov_0.901734_g28041_i0 | PRJNA1164198 | 28310 | 246 | 0.901734 | 2.21826564 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 117 | 2.84e-28 | NR | MBX3014934.1 | 2614250 | g28041 | i0 | 78.5 | 1.9390243902439 | 79 | 17 | 96.3 | 0 | 242 | 6 | 920 | 998 | MBX3014934.1 glycosyl hydrolase [Caldilineaceae bacterium] | diamond | 477 | 117 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 29914280 | 29914280 | PRJNA1164198_P_NODE_27331_length_248_cov_0.891429_g27062_i0 | PRJNA1164198 | 27331 | 248 | 0.891429 | 2.21074392 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 98.6 | 2.95e-23 | NR | MCL5995919.1 | 2026724 | g27062 | i0 | 63.4 | 0.991935483870968 | 82 | 30 | 99.2 | 0 | 247 | 2 | 138 | 219 | MCL5995919.1 zinc metallopeptidase [Chloroflexota bacterium] | diamond | 246 | 98.6 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 29965019 | 29965019 | PRJNA1164198_P_NODE_30771_length_242_cov_0.923077_g30502_i0 | PRJNA1164198 | 30771 | 242 | 0.923077 | 2.23384634 | Bacteria | 2 | Bacteria | Bacteria | 73.2 | 7.17e-13 | NR | MBL1135783.1 | 2026724 | g30502 | i0 | 56.8 | 9.3099173553719 | 74 | 26 | 84.3 | 3 | 207 | 4 | 19 | 92 | MBL1135783.1 hypothetical protein [Chloroflexota bacterium] | diamond | 2253 | 73.2 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 30912979 | 30912979 | PRJNA1164198_P_NODE_23374_length_257_cov_1.250000_g23105_i0 | PRJNA1164198 | 23374 | 257 | 1.25 | 3.2125 | root | 1 | Root_unresolved | Root_unresolved | 42.7 | 0.0118 | NR | MEA1958913.1 | 2026724 | g23105 | i0 | 77.3 | 0.560311284046693 | 22 | 5 | 25.7 | 0 | 95 | 160 | 43 | 64 | MEA1958913.1 LNR domain-containing protein [Chloroflexota bacterium] | diamond | 144 | 42.7 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 32695641 | 32695641 | PRJNA1164198_P_NODE_26420_length_249_cov_0.886364_g26151_i0 | PRJNA1164198 | 26420 | 249 | 0.886364 | 2.20704636 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 41.2 | 0.0448 | NR | MCU0484310.1 | 2026724 | g26151 | i0 | 34.4 | 0.734939759036145 | 61 | 28 | 59 | 2 | 243 | 97 | 23 | 83 | MCU0484310.1 hypothetical protein [Chloroflexota bacterium] | diamond | 183 | 41.2 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;