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contig_metadata

10 rows where bioproject = "PRJNA1164198" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1164198 · 10 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24537910 24537910 PRJNA1164198_P_NODE_26100_length_250_cov_0.881356_g25831_i0 PRJNA1164198 26100 250 0.881356 2.20339 Pseudomonadati 3379134 Bacteria Bacteria 120 1.88e-29   NR MBK9242364.1 1978231 g25831 i0 73.8 1.932 80 21 96 0 6 245 467 546 MBK9242364.1 ABC transporter ATP-binding protein [Acidobacteriota bacterium] diamond 483 120 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27103527 27103527 PRJNA1164198_P_NODE_24082_length_253_cov_0.966667_g23813_i0 PRJNA1164198 24082 253 0.966667 2.44566751 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 45.4 0.00328   NR HEY2018664.1 2212468 g23813 i0 39.4 0.782608695652174 66 40 78.3 0 48 245 45 110 HEY2018664.1 hypothetical protein [Bryobacteraceae bacterium] diamond 198 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27293309 27293309 PRJNA1164198_P_NODE_22943_length_259_cov_1.650538_g22674_i0 PRJNA1164198 22943 259 1.650538 4.27489342 Acidobacteriota bacterium 1978231 Bacteria Bacteria 52 2.54e-5   NR MDH3786748.1 1978231 g22674 i0 78.6 0.961389961389961 28 6 32.4 0 2 85 344 371 MDH3786748.1 thrombospondin type 3 repeat-containing protein [Acidobacteriota bacterium] diamond 249 52 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28524941 28524941 PRJNA1164198_P_NODE_23487_length_256_cov_1.415301_g23218_i0 PRJNA1164198 23487 256 1.415301 3.62317056 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.9 0.00802   NR HVG35933.1 2283092 g23218 i0 32.9 0.890625 76 44 89.1 1 249 22 3 71 HVG35933.1 DUF4157 domain-containing protein [Pyrinomonadaceae bacterium] diamond 228 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28524944 28524944 PRJNA1164198_P_NODE_24707_length_252_cov_0.871508_g24438_i0 PRJNA1164198 24707 252 0.871508 2.19620016 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.4 0.0469   NR PYV41202.1 1978231 g24438 i0 34.2 0.94047619047619 79 46 92.9 2 10 243 25 98 PYV41202.1 MAG: hypothetical protein DMG06_17890 [Acidobacteriota bacterium] diamond 237 42.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30040456 30040456 PRJNA1164198_P_NODE_25831_length_250_cov_0.881356_g25562_i0 PRJNA1164198 25831 250 0.881356 2.20339 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0305   NR MYH29992.1 1978231 g25562 i0 46.2 1.56 65 34 76.8 1 19 210 426 490 MYH29992.1 ABC transporter permease [Acidobacteriota bacterium] diamond 390 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31652112 31652112 PRJNA1164198_P_NODE_21777_length_266_cov_2.020725_g21508_i0 PRJNA1164198 21777 266 2.020725 5.3751285 Acidobacteriota bacterium 1978231 Bacteria Bacteria 46.2 0.00293   NR MBI4904142.1 1978231 g21508 i0 34.5 0.947368421052632 84 39 93.6 2 3 251 106 174 MBI4904142.1 pyrroloquinoline quinone-dependent dehydrogenase [Acidobacteriota bacterium] diamond 252 46.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31841900 31841900 PRJNA1164198_P_NODE_2337_length_812_cov_2.860622_g2138_i0 PRJNA1164198 2337 812 2.860622 23.22825064 Acidobacteriota bacterium 1978231 Bacteria Bacteria 123 1.09e-27   NR MBS1768271.1 1978231 g2138 i0 34.5 1.7179802955665 232 146 84.6 4 44 730 1164 1392 MBS1768271.1 hypothetical protein [Acidobacteriota bacterium] diamond 1395 123 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32601330 32601330 PRJNA1164198_P_NODE_29780_length_244_cov_0.912281_g29511_i0 PRJNA1164198 29780 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 96.7 4.07e-21   NR MBI1356569.1 1978231 g29511 i0 56.8 2.97540983606557 81 32 99.6 1 243 1 274 351 MBI1356569.1 hypothetical protein [Acidobacteriota bacterium] diamond 726 96.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32664085 32664085 PRJNA1164198_P_NODE_5200_length_551_cov_2.512552_g4947_i0 PRJNA1164198 5200 551 2.512552 13.84416152 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 139 1.4e-36   NR MDR3737318.1 2052142 g4947 i0 47.4 0.931034482758621 171 85 91.5 3 37 540 139 307 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 513 139 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;