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contig_metadata

3 rows where bioproject = "PRJNA1164198", tax_kingdom = "Methanobacteriati" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7417386 7417386 PRJNA1164198_P_NODE_21746_length_266_cov_3.093264_g21477_i0 PRJNA1164198 21746 266 3.093264 8.22808224 Methanobacteriati 3366610 Archaea Archaea 492 1.2099999999999999e-134   NTclustered gi|224979270|gb|FJ752570.1| 198240 g21477 i0 100 96.9736842105263 266 0 100 0 1 266 54 319 Uncultured methanogenic archaeon clone E18_16S1_Mx-03 16S ribosomal RNA gene, partial sequence blastn 25795 492 1 Archaea   Methanobacteriati Methanobacteriota         uncultured methanogenic archaeon
21988731 21988731 PRJNA1164198_P_NODE_27718_length_247_cov_0.896552_g27449_i0 PRJNA1164198 27718 247 0.896552 2.21448344 Salinirubellus litoreus 3131999 Archaea Archaea 54.7 0.006   NTclustered gi|2700494409|gb|CP147841.1| 3131999 g27449 i0 100 0.57085020242915 29 0 12 0 52 80 2610986 2610958 Salinirubellus litoreus strain SYNS196 chromosome, complete genome blastn 141 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus litoreus
23991709 23991709 PRJNA1164198_P_NODE_7139_length_470_cov_1.732997_g6878_i0 PRJNA1164198 7139 470 1.732997 8.1450859 Methanobacteriati 3366610 Archaea Archaea 869 0   NTclustered gi|91807144|gb|DQ445723.1| 379361 g6878 i0 100 99.9510638297872 470 0 100 0 1 470 341 810 Methanogenic archaeon CH1270 16S ribosomal RNA gene, partial sequence blastn 46977 869 1 Archaea   Methanobacteriati Methanobacteriota         methanogenic archaeon CH1270

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;