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contig_metadata

9 rows where bioproject = "PRJNA1164198" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
311990 311990 PRJNA1164198_P_NODE_23241_length_257_cov_2.565217_g22972_i0 PRJNA1164198 23241 257 2.565217 6.59260769 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 459 1.18e-124   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g22972 i0 98.833 100.610894941634 257 3 100 0 1 257 1504256 1504512 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 25857 459 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
5415026 5415026 PRJNA1164198_P_NODE_15385_length_315_cov_2.590909_g15116_i0 PRJNA1164198 15385 315 2.590909 8.16136335 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 549 8.579999999999997e-152   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g15116 i0 98.095 97.584126984127 315 6 100 0 1 315 1538062 1537748 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 30739 549 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
7417386 7417386 PRJNA1164198_P_NODE_21746_length_266_cov_3.093264_g21477_i0 PRJNA1164198 21746 266 3.093264 8.22808224 Methanobacteriati 3366610 Archaea Archaea 492 1.2099999999999999e-134   NTclustered gi|224979270|gb|FJ752570.1| 198240 g21477 i0 100 96.9736842105263 266 0 100 0 1 266 54 319 Uncultured methanogenic archaeon clone E18_16S1_Mx-03 16S ribosomal RNA gene, partial sequence blastn 25795 492 1 Archaea   Methanobacteriati Methanobacteriota         uncultured methanogenic archaeon
9239857 9239857 PRJNA1164198_P_NODE_16888_length_301_cov_0.921053_g16619_i0 PRJNA1164198 16888 301 0.921053 2.77236953 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 556 4.87e-154   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g16619 i0 100 45.3521594684385 301 0 100 0 1 301 1502910 1502610 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 13651 556 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
14340958 14340958 PRJNA1164198_P_NODE_4632_length_584_cov_1.933464_g4384_i0 PRJNA1164198 4632 584 1.933464 11.29142976 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 1079 0   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g4384 i0 100 109.635273972603 584 0 100 0 1 584 1503535 1502952 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 64027 1079 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
18163627 18163627 PRJNA1164198_P_NODE_31515_length_232_cov_2.767296_g31246_i0 PRJNA1164198 31515 232 2.767296 6.42012672 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 427 2.95e-115   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g31246 i0 100 166.521551724138 231 0 99 0 2 232 1502377 1502607 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 38633 427 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
21988731 21988731 PRJNA1164198_P_NODE_27718_length_247_cov_0.896552_g27449_i0 PRJNA1164198 27718 247 0.896552 2.21448344 Salinirubellus litoreus 3131999 Archaea Archaea 54.7 0.006   NTclustered gi|2700494409|gb|CP147841.1| 3131999 g27449 i0 100 0.57085020242915 29 0 12 0 52 80 2610986 2610958 Salinirubellus litoreus strain SYNS196 chromosome, complete genome blastn 141 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus litoreus
23991709 23991709 PRJNA1164198_P_NODE_7139_length_470_cov_1.732997_g6878_i0 PRJNA1164198 7139 470 1.732997 8.1450859 Methanobacteriati 3366610 Archaea Archaea 869 0   NTclustered gi|91807144|gb|DQ445723.1| 379361 g6878 i0 100 99.9510638297872 470 0 100 0 1 470 341 810 Methanogenic archaeon CH1270 16S ribosomal RNA gene, partial sequence blastn 46977 869 1 Archaea   Methanobacteriati Methanobacteriota         methanogenic archaeon CH1270
24537933 24537933 PRJNA1164198_P_NODE_29840_length_243_cov_2.664706_g29571_i0 PRJNA1164198 29840 243 2.664706 6.47523558 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 442 1.1099999999999995e-119   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g29571 i0 99.587 10.8353909465021 242 1 99 0 2 243 1503976 1504217 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 2633 442 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;