RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1164198", tax_kingdom = "Metazoa" and tax_phylum = "Tardigrada"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24537898 24537898 PRJNA1164198_P_NODE_24380_length_253_cov_0.866667_g24111_i0 PRJNA1164198 24380 253 0.866667 2.19266751 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 206 1.67e-48   NTclustered gi|2493466698|ref|XM_055488531.1| 2943436 g24111 i0 82.305 37.9130434782609 243 37 95 6 12 251 1064 825 PREDICTED: Paramacrobiotus metropolitanus eukaryotic peptide chain release factor subunit 1-like (LOC129592486), mRNA blastn 9592 206 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
29914276 29914276 PRJNA1164198_P_NODE_22791_length_260_cov_1.663102_g22522_i0 PRJNA1164198 22791 260 1.663102 4.3240652 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 48.1 5.89e-4   NR XP_055331678.1 2943436 g22522 i0 34.5 1.52307692307692 84 52 94.6 3 257 12 480 562 XP_055331678.1 transient receptor potential cation channel subfamily A member 1-like isoform X2 [Paramacrobiotus metropolitanus] diamond 396 48.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;