RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where bioproject = "PRJNA1164198", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 14 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 14 ✖

bioproject 1

  • PRJNA1164198 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6689888 6689888 PRJNA1164198_P_NODE_20806_length_272_cov_1.532663_g20537_i0 PRJNA1164198 20806 272 1.532663 4.16884336 Mytilus coruscus 42192 Mollusca Mollusca 113 5.01e-28   NR CAC5423815.1 42192 g20537 i0 71.1 4.03676470588235 76 22 83.8 0 39 266 195 270 CAC5423815.1 RP-S12e [Mytilus coruscus] diamond 1098 113 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
7965175 7965175 PRJNA1164198_P_NODE_14647_length_323_cov_1.480000_g14378_i0 PRJNA1164198 14647 323 1.48 4.7804 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 4.45e-30   NR XP_046335871.2 6454 g14378 i0 63.3 6.59442724458204 90 33 83.6 0 272 3 44 133 XP_046335871.2 protein disulfide-isomerase A4-like [Haliotis rufescens] diamond 2130 123 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
15614739 15614739 PRJNA1164198_P_NODE_12993_length_344_cov_1.011070_g12724_i0 PRJNA1164198 12993 344 1.01107 3.4780808 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.033   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g12724 i0 100 0.162790697674419 28 0 8 0 273 300 55977414 55977387 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21988691 21988691 PRJNA1164198_P_NODE_19638_length_279_cov_3.432039_g19369_i0 PRJNA1164198 19638 279 3.432039 9.57538881 Mya arenaria 6604 Mollusca Mollusca 255 1.82e-63   NTclustered gi|2427418402|ref|XM_052927352.1| 6604 g19369 i0 86.076 79.7813620071685 237 33 85 0 1 237 339 103 PREDICTED: Mya arenaria tubulin beta chain-like (LOC128219534), mRNA blastn 22259 255 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
23264178 23264178 PRJNA1164198_P_NODE_17059_length_299_cov_1.380531_g16790_i0 PRJNA1164198 17059 299 1.380531 4.12778769 Mizuhopecten yessoensis 6573 Mollusca Mollusca 54.7 0.008   NTclustered gi|1207924050|ref|XM_021495386.1| 6573 g16790 i0 94.286 0.234113712374582 35 2 12 0 83 117 916 950 PREDICTED: Mizuhopecten yessoensis WW domain-binding protein 11-like (LOC110448897), transcript variant X2, mRNA blastn 70 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
23264202 23264202 PRJNA1164198_P_NODE_22619_length_261_cov_1.563830_g22350_i0 PRJNA1164198 22619 261 1.56383 4.0815963 Mizuhopecten yessoensis 6573 Mollusca Mollusca 165 2.93e-36   NTclustered gi|1207979966|ref|XM_021483825.1| 6573 g22350 i0 84.302 44.3793103448276 172 23 65 4 64 233 76 245 PREDICTED: Mizuhopecten yessoensis 40S ribosomal protein S14-A-like (LOC110440664), partial mRNA blastn 11583 165 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
26775018 26775018 PRJNA1164198_P_NODE_4881_length_568_cov_1.569697_g4631_i0 PRJNA1164198 4881 568 1.569697 8.91587896 Stylommatophora 6527 Mollusca Mollusca 198 1.2100000000000004e-59   NR CAG5118462.1 100452 g4631 i0 50.3 6.02112676056338 189 91 98.2 1 2 559 84 272 CAG5118462.1 unnamed protein product [Candidula unifasciata] diamond 3420 199 0.994974874371859 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
27956522 27956522 PRJNA1164198_P_NODE_11645_length_364_cov_1.879725_g11377_i0 PRJNA1164198 11645 364 1.879725 6.842199 Littorina saxatilis 31220 Mollusca Mollusca 45.1 0.0209   NR XP_070176500.1 31220 g11377 i0 47.6 0.346153846153846 42 22 34.6 0 290 165 506 547 XP_070176500.1 uncharacterized protein [Littorina saxatilis] diamond 126 45.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
28240442 28240442 PRJNA1164198_P_NODE_19206_length_283_cov_1.085714_g18937_i0 PRJNA1164198 19206 283 1.085714 3.07257062 Acanthosepion pharaonis 158019 Mollusca Mollusca 43.5 0.0327   NR CAE1247056.1 158019 g18937 i0 51 1.01766784452297 96 27 95.4 4 12 281 73 154 CAE1247056.1 unnamed protein product [Acanthosepion pharaonis] diamond 288 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
30849565 30849565 PRJNA1164198_P_NODE_21394_length_268_cov_3.707692_g21125_i0 PRJNA1164198 21394 268 3.707692 9.93661456 Mollusca 6447 Mollusca Mollusca 120 9.21e-32   NR XP_045183074.1 6596 g21125 i0 67.4 4.82462686567164 86 28 96.3 0 258 1 1 86 XP_045183074.1 40S ribosomal protein S8-like [Mercenaria mercenaria] diamond 1293 120 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
30893696 30893696 PRJNA1164198_P_NODE_24354_length_253_cov_0.866667_g24085_i0 PRJNA1164198 24354 253 0.866667 2.19266751 Mya arenaria 6604 Mollusca Mollusca 45.1 0.00657   NR XP_052765402.1 6604 g24085 i0 40.4 1.11462450592885 47 23 55.7 2 228 88 414 455 XP_052765402.1 multiple epidermal growth factor-like domains protein 10 [Mya arenaria] diamond 282 45.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
31810450 31810450 PRJNA1164198_P_NODE_23017_length_259_cov_1.209677_g22748_i0 PRJNA1164198 23017 259 1.209677 3.13306343 Pomacea canaliculata 400727 Mollusca Mollusca 104 1.39e-24   NR PVD19081.1 400727 g22748 i0 92.7 13.1003861003861 55 4 63.7 0 1 165 97 151 PVD19081.1 hypothetical protein C0Q70_21640 [Pomacea canaliculata] diamond 3393 105 0.990476190476191 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
32114627 32114627 PRJNA1164198_P_NODE_26978_length_248_cov_1.234286_g26709_i0 PRJNA1164198 26978 248 1.234286 3.06102928 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.1 7.57e-12   NR KAH3852037.1 45954 g26709 i0 42.9 2.73387096774194 77 40 89.5 2 25 246 253 328 KAH3852037.1 hypothetical protein DPMN_094530, partial [Dreissena polymorpha] diamond 678 70.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
32506739 32506739 PRJNA1164198_P_NODE_24179_length_253_cov_0.866667_g23910_i0 PRJNA1164198 24179 253 0.866667 2.19266751 Mizuhopecten yessoensis 6573 Mollusca Mollusca 86.3 1.97e-17   NR OWF48565.1 6573 g23910 i0 55.8 4.12648221343874 86 33 98.4 3 251 3 590 673 OWF48565.1 DNA-directed RNA polymerase I subunit RPA2 [Mizuhopecten yessoensis] diamond 1044 86.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;