RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1164198", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1164198 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4867536 4867536 PRJNA1164198_P_NODE_12864_length_345_cov_2.735294_g12595_i0 PRJNA1164198 12864 345 2.735294 9.4367643 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 140 3.65e-38   NR XP_071487048.1 105358 g12595 i0 72.5 15.6347826086957 91 25 79.1 0 324 52 11 101 XP_071487048.1 ADP,ATP carrier protein-like [Diadema antillarum] diamond 5394 141 0.99290780141844 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
27261803 27261803 PRJNA1164198_P_NODE_13503_length_337_cov_1.477273_g13234_i0 PRJNA1164198 13503 337 1.477273 4.97841001 Anneissia japonica 1529436 Echinodermata other_Eukaryota 127 1.0999999999999999e-33   NR XP_033125693.1 1529436 g13234 i0 65.2 3.13353115727003 89 31 79.2 0 3 269 171 259 XP_033125693.1 40S ribosomal protein S4, X isoform-like [Anneissia japonica] diamond 1056 127 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28607192 28607192 PRJNA1164198_P_NODE_22887_length_259_cov_4.091398_g22618_i0 PRJNA1164198 22887 259 4.091398 10.59672082 Opisthokonta 33154 Echinodermata other_Eukaryota 109 1.39e-28   NR XP_022110585.1 133434 g22618 i0 70.1 8.15444015444015 77 22 89.2 1 234 4 5 80 XP_022110585.1 60S ribosomal protein L32-like [Acanthaster planci] diamond 2112 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;