RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1164198", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA1164198 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27324981 27324981 PRJNA1164198_P_NODE_27983_length_247_cov_0.896552_g27714_i0 PRJNA1164198 27983 247 0.896552 2.21448344 Prymnesium parvum 97485 Haptophyta other_Eukaryota 130 1.92e-33   NR KAL1511222.1 97485 g27714 i0 77.8 2.93927125506073 81 18 98.4 0 245 3 205 285 KAL1511222.1 hypothetical protein AB1Y20_006034 [Prymnesium parvum] diamond 726 130 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
27830132 27830132 PRJNA1164198_P_NODE_19524_length_280_cov_2.251208_g19255_i0 PRJNA1164198 19524 280 2.251208 6.3033824 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 131 2.17e-36   NR KOO35252.1 1460289 g19255 i0 73.3 10.6178571428571 90 24 96.4 0 10 279 7 96 KOO35252.1 40s ribosomal protein s9 [Chrysochromulina tobinii] diamond 2973 131 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;