RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1164198", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1164198 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27103525 27103525 PRJNA1164198_P_NODE_21262_length_269_cov_1.989796_g20993_i0 PRJNA1164198 21262 269 1.989796 5.35255124 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.7 5.14e-15   NR MEZ0208637.1 2053589 g20993 i0 40 0.892193308550186 80 48 89.2 0 29 268 1237 1316 MEZ0208637.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 240 79.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27893215 27893215 PRJNA1164198_P_NODE_8125_length_438_cov_1.594521_g7863_i0 PRJNA1164198 8125 438 1.594521 6.98400198 Minisyncoccota bacterium 2053589 Bacteria Bacteria 123 2.5199999999999996e-29   NR MEZ0208637.1 2053589 g7863 i0 41 0.986301369863014 144 85 98.6 0 433 2 785 928 MEZ0208637.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 432 123 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;