contig_metadata
9 rows where bioproject = "PRJNA1160211" and tax_phylum = "Vulcanimicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7963449 | 7963449 | PRJNA1160211_S_NODE_274147_length_245_cov_4.424419_g272914_i0 | PRJNA1160211 | 274147 | 245 | 4.424419 | 10.83982655 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 339 | 1.5199999999999998e-88 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g272914 | i0 | 94.196 | 182.604081632653 | 224 | 9 | 91 | 4 | 23 | 245 | 5032351 | 5032571 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 44738 | 339 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 10513135 | 10513135 | PRJNA1160211_S_NODE_158389_length_363_cov_2.962069_g157156_i0 | PRJNA1160211 | 158389 | 363 | 2.962069 | 10.75231047 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 527 | 4.6899999999999984e-145 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g157156 | i0 | 94.737 | 83.9834710743802 | 342 | 13 | 94 | 5 | 24 | 363 | 5031380 | 5031718 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 30486 | 527 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 15612738 | 15612738 | PRJNA1160211_S_NODE_23593_length_686_cov_27.264274_g22553_i0 | PRJNA1160211 | 23593 | 686 | 27.264274 | 187.03291964 | Candidatus Cybelea sp. | 2952917 | Bacteria | Bacteria | 210 | 2.48e-60 | NR | HYM33218.1 | 2952917 | g22553 | i0 | 58.4 | 0.756559766763848 | 173 | 71 | 75.7 | 1 | 168 | 686 | 24 | 195 | HYM33218.1 ABC transporter ATP-binding protein/permease [Candidatus Cybelea sp.] | diamond | 519 | 210 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiia | Vulcanimicrobiales | Vulcanimicrobiaceae | Candidatus Cybelea | Candidatus Cybelea sp. | ||
| 15612979 | 15612979 | PRJNA1160211_S_NODE_273_length_2023_cov_21.466667_g194_i0 | PRJNA1160211 | 273 | 2023 | 21.466667 | 434.27067341 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 1698 | 0 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g194 | i0 | 82.283 | 701.39446366782 | 2032 | 294 | 99 | 60 | 1 | 2000 | 5033227 | 5031230 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 1418921 | 1698 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 16887366 | 16887366 | PRJNA1160211_S_NODE_274_length_2023_cov_14.342051_g194_i1 | PRJNA1160211 | 274 | 2023 | 14.342051 | 290.13969173 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 1714 | 0 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g194 | i1 | 82.448 | 675.260998517054 | 2034 | 287 | 99 | 64 | 1 | 2000 | 5033227 | 5031230 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 1366053 | 1714 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 19435232 | 19435232 | PRJNA1160211_S_NODE_142756_length_385_cov_4.842949_g141523_i0 | PRJNA1160211 | 142756 | 385 | 4.842949 | 18.64535365 | Vulcanimicrobium alpinum | 3016050 | Bacteria | Bacteria | 158 | 7.57e-34 | NTclustered | gi|2416250577|dbj|AP025523.1| | 3016050 | g141523 | i0 | 79.583 | 90.1038961038961 | 240 | 33 | 60 | 11 | 71 | 302 | 1949920 | 1950151 | Vulcanimicrobium alpinum WC8-2 DNA, complete genome | blastn | 34690 | 158 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiia | Vulcanimicrobiales | Vulcanimicrobiaceae | Vulcanimicrobium | Vulcanimicrobium alpinum | ||
| 23261642 | 23261642 | PRJNA1160211_S_NODE_168939_length_348_cov_31.440000_g167706_i0 | PRJNA1160211 | 168939 | 348 | 31.44 | 109.4112 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 285 | 2.99e-72 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g167706 | i0 | 82.822 | 110.41091954023 | 326 | 48 | 93 | 7 | 26 | 347 | 5031453 | 5031774 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 38423 | 285 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 29914229 | 29914229 | PRJNA1160211_S_NODE_17991_length_724_cov_23.887865_g17029_i0 | PRJNA1160211 | 17991 | 724 | 23.887865 | 172.9481426 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 258 | 4.24e-84 | NR | MFA5505376.1 | 3107663 | g17029 | i0 | 72 | 0.75414364640884 | 182 | 51 | 75.4 | 0 | 552 | 7 | 1 | 182 | MFA5505376.1 50S ribosomal protein L10 [Vulcanimicrobiota bacterium] | diamond | 546 | 258 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 32821639 | 32821639 | PRJNA1160211_S_NODE_277380_length_244_cov_0.900585_g276147_i0 | PRJNA1160211 | 277380 | 244 | 0.900585 | 2.1974274 | Candidatus Baltobacteraceae bacterium | 3107660 | Bacteria | Bacteria | 59.7 | 1.41e-9 | NR | HVA28692.1 | 2952909 | g276147 | i0 | 51.4 | 0.885245901639344 | 72 | 33 | 86.1 | 1 | 219 | 10 | 2 | 73 | HVA28692.1 type II toxin-antitoxin system VapB family antitoxin [Candidatus Baltobacteraceae bacterium] | diamond | 216 | 59.7 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiia | Vulcanimicrobiales | Vulcanimicrobiaceae | Candidatus Baltobacteraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;