contig_metadata
9 rows where bioproject = "PRJNA1160211" and tax_phylum = "Rhodothermota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4866208 | 4866208 | PRJNA1160211_S_NODE_129644_length_405_cov_9.587349_g128412_i0 | PRJNA1160211 | 129644 | 405 | 9.587349 | 38.82876345 | Bacteria | 2 | Bacteria | Bacteria | 353 | 9.51e-93 | NTclustered | gi|2518540634|emb|OX638295.1| | 2306054 | g128412 | i0 | 84.182 | 193.923456790123 | 373 | 49 | 91 | 9 | 7 | 373 | 368516 | 368148 | MAG: Rhodothermales bacterium isolate 379627e8-994f-481d-907a-dd5b185e1f88 genome assembly, chromosome: 1 | blastn | 78539 | 355 | 0.994366197183099 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 9967110 | 9967110 | PRJNA1160211_S_NODE_70508_length_520_cov_9.080537_g69301_i0 | PRJNA1160211 | 70508 | 520 | 9.080537 | 47.2187924 | Rubrivirga | 1434037 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g69301 | i0 | 90.661 | 292.753846153846 | 514 | 40 | 98 | 7 | 9 | 520 | 807307 | 806800 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 152232 | 682 | 0.991202346041056 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 11241456 | 11241456 | PRJNA1160211_S_NODE_142269_length_386_cov_2.738019_g141036_i0 | PRJNA1160211 | 142269 | 386 | 2.738019 | 10.56875334 | Rhodothermus | 29548 | Bacteria | Bacteria | 388 | 2.47e-103 | NTclustered | gi|470485382|ref|NR_076698.1| | 29549 | g141036 | i0 | 87.069 | 496.282383419689 | 348 | 39 | 89 | 6 | 26 | 369 | 1584 | 1929 | Rhodothermus marinus strain DSM 4252 23S ribosomal RNA gene, complete sequence | blastn | 191565 | 388 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 16887477 | 16887477 | PRJNA1160211_S_NODE_295614_length_220_cov_4.510204_g294381_i0 | PRJNA1160211 | 295614 | 220 | 4.510204 | 9.9224488 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 340 | 3.71e-89 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g294381 | i0 | 97.487 | 197.863636363636 | 199 | 5 | 90 | 0 | 22 | 220 | 805345 | 805543 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 43530 | 340 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 18161779 | 18161779 | PRJNA1160211_S_NODE_264895_length_250_cov_3.508475_g263662_i0 | PRJNA1160211 | 264895 | 250 | 3.508475 | 8.7711875 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 244 | 3.48e-60 | NTclustered | gi|2874254104|emb|OY970187.1| | 2838334 | g263662 | i0 | 86.818 | 27.14 | 220 | 27 | 87 | 2 | 23 | 240 | 1309157 | 1308938 | MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 | blastn | 6785 | 244 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 22715986 | 22715986 | PRJNA1160211_S_NODE_84198_length_489_cov_7.745192_g82979_i0 | PRJNA1160211 | 84198 | 489 | 7.745192 | 37.87398888 | Rubrivirga | 1434037 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g82979 | i0 | 93.631 | 261.505112474438 | 471 | 29 | 96 | 1 | 1 | 470 | 805813 | 805343 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 127876 | 702 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 23262481 | 23262481 | PRJNA1160211_S_NODE_285379_length_238_cov_3.600000_g284146_i0 | PRJNA1160211 | 285379 | 238 | 3.6 | 8.568 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 278 | 3.24e-70 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g284146 | i0 | 90.995 | 299.352941176471 | 211 | 11 | 86 | 5 | 12 | 215 | 806620 | 806411 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 71246 | 278 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 25265244 | 25265244 | PRJNA1160211_S_NODE_61800_length_542_cov_28.396588_g60611_i0 | PRJNA1160211 | 61800 | 542 | 28.396588 | 153.90950696 | Rhodothermales | 1853224 | Bacteria | Bacteria | 512 | 2.03e-140 | NTclustered | gi|1167574847|gb|CP020382.1| | 1779382 | g60611 | i0 | 85.265 | 390.546125461255 | 509 | 62 | 92 | 12 | 17 | 517 | 2906320 | 2906823 | Rhodothermaceae bacterium RA chromosome, complete genome | blastn | 211676 | 512 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermaceae bacterium RA | ||
| 31240950 | 31240950 | PRJNA1160211_S_NODE_28495_length_659_cov_16.648464_g27404_i0 | PRJNA1160211 | 28495 | 659 | 16.648464 | 109.71337776 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 93.6 | 5.13e-18 | NR | HMB91192.1 | 2306054 | g27404 | i0 | 42.3 | 0.946889226100152 | 104 | 59 | 46.9 | 1 | 25 | 333 | 119 | 222 | HMB91192.1 serine protease [Rhodothermales bacterium] | diamond | 624 | 93.6 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;