RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1160211" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1160211 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27293250 27293250 PRJNA1160211_S_NODE_123323_length_415_cov_25.397661_g122094_i0 PRJNA1160211 123323 415 25.397661 105.40029315 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 160 7.61e-47   NR XP_002778466.1 423536 g122094 i0 67.5 0.824096385542169 114 36 81.7 1 393 55 77 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 342 160 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28998725 28998725 PRJNA1160211_S_NODE_91248_length_474_cov_30.002494_g90025_i0 PRJNA1160211 91248 474 30.002494 142.21182156 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 113 7.360000000000001e-29   NR KAF4660233.1 32597 g90025 i0 52.7 0.708860759493671 112 53 70.9 0 438 103 15 126 KAF4660233.1 histone h2a [Perkinsus olseni] diamond 336 113 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;