RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1160211", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Peploviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1160211 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1038527 1038527 PRJNA1160211_S_NODE_222681_length_287_cov_1.037383_g221448_i0 PRJNA1160211 222681 287 1.037383 2.97728921 Heunggongvirae 2731360 Viruses Viruses 102 2.6e-17   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g221448 i0 98.305 280.271777003484 59 0 44 1 1 59 272 215 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 80438 102 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
7963025 7963025 PRJNA1160211_S_NODE_212847_length_297_cov_0.950893_g211614_i0 PRJNA1160211 212847 297 0.950893 2.82415221 Cytomegalovirus cercopithecinebeta5 3050258 Viruses Viruses 446 1.0799999999999999e-120   NTclustered gi|346331209|gb|AF191077.2| 36452 g211614 i0 99.19 121.734006734007 247 2 83 0 46 292 606 360 Stealth virus 1 clone 3B528, genomic sequence blastn 36155 446 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5
12517712 12517712 PRJNA1160211_S_NODE_72030_length_516_cov_26.611738_g70821_i0 PRJNA1160211 72030 516 26.611738 137.31656808 Heunggongvirae 2731360 Viruses Viruses 130 2.27e-25   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g70821 i0 93.258 114.945736434109 89 4 17 2 429 516 174 261 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 59312 130 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
13063429 13063429 PRJNA1160211_S_NODE_218091_length_291_cov_3.334862_g216858_i0 PRJNA1160211 218091 291 3.334862 9.70444842 Iltovirus gallidalpha1 3050286 Viruses Viruses 80.5 1.24e-10   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g216858 i0 100 59.3058419243986 43 0 15 0 249 291 213 255 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 17258 80.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
20164784 20164784 PRJNA1160211_S_NODE_194716_length_317_cov_1.368852_g193483_i0 PRJNA1160211 194716 317 1.368852 4.33926084 Heunggongvirae 2731360 Viruses Viruses 106 2.25e-18   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g193483 i0 95.588 265.675078864353 68 0 42 3 252 317 206 272 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 84219 106 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
23262503 23262503 PRJNA1160211_S_NODE_288539_length_234_cov_2.068323_g287306_i0 PRJNA1160211 288539 234 2.068323 4.83987582 Cytomegalovirus cercopithecinebeta5 3050258 Viruses Viruses 429 8.289999999999998e-116   NTclustered gi|6561414|gb|AF191075.1|AF191075 36452 g287306 i0 100 6.78205128205128 232 0 99 0 1 232 1487 1256 Stealth virus 1 clone 3B512, genomic sequence blastn 1587 429 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus cercopithecinebeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;