RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA1160211", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Negarnaviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1160211 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5412535 5412535 PRJNA1160211_S_NODE_175485_length_340_cov_3.850187_g174252_i0 PRJNA1160211 175485 340 3.850187 13.0906358 Orthorubulavirus mammalis 3052558 Viruses Viruses 490 5.74e-134   NTclustered gi|2562721692|gb|OQ994985.1| 2905673 g174252 i0 100 123.723529411765 265 0 78 0 53 317 6488 6224 Parainfluenza virus 5 strain GX2020, complete genome blastn 42066 490 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6687311 6687311 PRJNA1160211_S_NODE_159306_length_362_cov_0.858131_g158073_i0 PRJNA1160211 159306 362 0.858131 3.10643422 Orthorubulavirus mammalis 3052558 Viruses Viruses 538 2.1599999999999998e-148   NTclustered gi|2562721692|gb|OQ994985.1| 2905673 g158073 i0 99.66 75.0469613259668 294 1 81 0 18 311 7495 7788 Parainfluenza virus 5 strain GX2020, complete genome blastn 27167 538 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
9966629 9966629 PRJNA1160211_S_NODE_219208_length_290_cov_3.423963_g217975_i0 PRJNA1160211 219208 290 3.423963 9.9294927 Orthorubulavirus 2560195 Viruses Viruses 536 6.079999999999999e-148   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g217975 i0 100 73.3413793103448 290 0 100 0 1 290 649 938 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 21269 536 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
11242183 11242183 PRJNA1160211_S_NODE_5209_length_938_cov_119.989595_g4632_i0 PRJNA1160211 5209 938 119.989595 1125.5024011 Orthorubulavirus 2560195 Viruses Viruses 1526 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g4632 i0 99.29 107.38592750533 845 5 90 1 71 915 1796 2639 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 100728 1537 0.992843201040989 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13791781 13791781 PRJNA1160211_S_NODE_205411_length_304_cov_423.549784_g204178_i0 PRJNA1160211 205411 304 423.549784 1287.59134336 Orthorubulavirus 2560195 Viruses Viruses 296 1.19e-75   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g204178 i0 100 49.8914473684211 160 0 53 0 75 234 4660 4501 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 15167 296 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13791816 13791816 PRJNA1160211_S_NODE_21331_length_701_cov_1.907643_g20314_i0 PRJNA1160211 21331 701 1.907643 13.37257743 Orthorubulavirus 2560195 Viruses Viruses 1133 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g20314 i0 99.518 74.6062767475036 622 3 89 0 50 671 677 56 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 52299 1144 0.990384615384615 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16340991 16340991 PRJNA1160211_S_NODE_211553_length_298_cov_2.520000_g210320_i0 PRJNA1160211 211553 298 2.52 7.5096 Orthorubulavirus 2560195 Viruses Viruses 551 2.239999999999999e-152   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g210320 i0 100 83.0335570469799 298 0 100 0 1 298 2777 3074 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 24744 551 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18890293 18890293 PRJNA1160211_S_NODE_278435_length_243_cov_1.958824_g277202_i0 PRJNA1160211 278435 243 1.958824 4.75994232 Orthorubulavirus 2560195 Viruses Viruses 438 1.4399999999999996e-118   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g277202 i0 99.177 69 243 2 100 0 1 243 3979 3737 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 16767 438 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18890401 18890401 PRJNA1160211_S_NODE_33515_length_636_cov_2.369449_g32404_i0 PRJNA1160211 33515 636 2.369449 15.06969564 Orthorubulavirus 2560195 Viruses Viruses 1170 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g32404 i0 99.843 70.7845911949686 636 1 100 0 1 636 928 1563 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 45019 1170 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21986409 21986409 PRJNA1160211_S_NODE_199258_length_311_cov_9.378151_g198025_i0 PRJNA1160211 199258 311 9.378151 29.16604961 brine shrimp yue-like virus 3 2900455 Viruses Viruses 499 8.639999999999999e-137   NTclustered gi|2209094280|gb|OL472816.1| 2900455 g198025 i0 100 3.47266881028939 270 0 87 0 24 293 1220 951 MAG: Brine shrimp yue-like virus 3 isolate 02/QH/92-02 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1080 499 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
23990397 23990397 PRJNA1160211_S_NODE_125759_length_412_cov_1.356932_g124529_i0 PRJNA1160211 125759 412 1.356932 5.59055984 Orthorubulavirus 2560195 Viruses Viruses 743 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g124529 i0 100 66.3495145631068 402 0 98 0 1 402 3509 3108 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 27336 743 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
25264940 25264940 PRJNA1160211_S_NODE_250740_length_261_cov_2.478723_g249507_i0 PRJNA1160211 250740 261 2.478723 6.46946703 Orthorubulavirus 2560195 Viruses Viruses 398 2.649999999999999e-106   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g249507 i0 98.661 83.360153256705 224 3 86 0 38 261 1216 1439 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 21757 398 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;