RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA1160211" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1160211 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7417004 7417004 PRJNA1160211_S_NODE_9126_length_832_cov_9.845850_g8385_i0 PRJNA1160211 9126 832 9.84585 81.917472 Hyaloraphidium curvatum 82268 Fungi Fungi 191 1.3599999999999996e-55   NR KAI9023467.1 82268 g8385 i0 40.1 1.80288461538462 252 146 89.1 3 1 741 36 287 KAI9023467.1 dienelactone hydrolase family-domain-containing protein [Hyaloraphidium curvatum] diamond 1500 191 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
9238727 9238727 PRJNA1160211_S_NODE_78948_length_501_cov_1.869159_g77732_i0 PRJNA1160211 78948 501 1.869159 9.36448659 Chytridiomycetes 451435 Fungi Fungi 167 2.77e-50   NR KAI8920797.1 109895 g77732 i0 77.4 1.24550898203593 106 24 63.5 0 499 182 19 124 KAI8920797.1 ribosomal protein S27a, partial [Powellomyces hirtus] diamond 624 167 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
21985902 21985902 PRJNA1160211_S_NODE_130138_length_404_cov_25.688822_g128906_i0 PRJNA1160211 130138 404 25.688822 103.78284088 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 63.2 4.6e-9   NR XP_016606696.1 645134 g128906 i0 50 0.72029702970297 50 25 37.1 0 31 180 134 183 XP_016606696.1 uncharacterized protein SPPG_06338 [Spizellomyces punctatus DAOM BR117] diamond 291 63.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
24535660 24535660 PRJNA1160211_S_NODE_200460_length_310_cov_3.004219_g199227_i0 PRJNA1160211 200460 310 3.004219 9.3130789 Chytriomyces sp. 2012326 Fungi Fungi 209 1.62e-49   NTclustered gi|1866582726|gb|MT730901.1| 2012326 g199227 i0 80.135 93.9322580645161 297 45 93 13 23 310 4824 5115 Chytriomyces sp. isolate JEL0937 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29119 209 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp.
26755309 26755309 PRJNA1160211_S_NODE_78741_length_501_cov_5.546729_g77525_i0 PRJNA1160211 78741 501 5.546729 27.78911229 Piromyces finnis 1754191 Fungi Fungi 53.1 7.12e-5   NR ORX44519.1 1754191 g77525 i0 27.6 3.40119760479042 145 90 84.4 6 14 436 89 222 ORX44519.1 hypothetical protein BCR36DRAFT_301500 [Piromyces finnis] diamond 1704 53.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces finnis
26996232 26996232 PRJNA1160211_S_NODE_131342_length_403_cov_2.075758_g130110_i0 PRJNA1160211 131342 403 2.075758 8.36530474 Eukaryota 2759 Fungi Fungi 48.9 0.0013   NR KAI8900349.1 382532 g130110 i0 30 1.47394540942928 90 60 66.3 3 9 275 292 379 KAI8900349.1 hypothetical protein BC833DRAFT_582067 [Globomyces pollinis-pini] diamond 594 48.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini
27134831 27134831 PRJNA1160211_S_NODE_168242_length_349_cov_13.822464_g167009_i0 PRJNA1160211 168242 349 13.822464 48.24039936 Geranomyces variabilis 109894 Fungi Fungi 55.8 2.76e-6   NR KAJ3144523.1 109894 g167009 i0 58.3 0.412607449856734 48 20 41.3 0 130 273 16 63 KAJ3144523.1 hypothetical protein HDU89_008205 [Geranomyces variabilis] diamond 144 55.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
27293254 27293254 PRJNA1160211_S_NODE_183043_length_330_cov_22.182879_g181810_i0 PRJNA1160211 183043 330 22.182879 73.2035007 Spizellomyces sp. 'palustris' 117820 Fungi Fungi 57.8 2.3e-7   NR TPX68877.1 117820 g181810 i0 83.3 1.40909090909091 30 5 27.3 0 101 190 181 210 TPX68877.1 hypothetical protein SpCBS45565_g02806 [Spizellomyces sp. 'palustris'] diamond 465 57.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
28398445 28398445 PRJNA1160211_S_NODE_92626_length_472_cov_2.639098_g91403_i0 PRJNA1160211 92626 472 2.639098 12.45654256 Gonapodya prolifera JEL478 1344416 Fungi Fungi 110 1.04e-25   NR KXS21930.1 1344416 g91403 i0 40.9 1.63347457627119 127 72 78.8 2 443 72 198 324 KXS21930.1 hypothetical protein M427DRAFT_51303 [Gonapodya prolifera JEL478] diamond 771 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
28986320 28986320 PRJNA1160211_S_NODE_18748_length_718_cov_57.395349_g17767_i0 PRJNA1160211 18748 718 57.395349 412.09860582 Neocallimastigaceae 29007 Fungi Fungi 66.2 1.26e-10   NR ORX57888.1 1754191 g17767 i0 52.9 0.664345403899721 51 22 21.3 1 227 379 7 55 ORX57888.1 UPF0057-domain-containing protein [Piromyces finnis] diamond 477 66.6 0.993993993993994 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces finnis
29660991 29660991 PRJNA1160211_S_NODE_150550_length_374_cov_2.132890_g149317_i0 PRJNA1160211 150550 374 2.13289 7.9770086 Hyaloraphidium curvatum 82268 Fungi Fungi 183 1.07e-50   NR KAI9009243.1 82268 g149317 i0 63.7 0.994652406417112 124 45 99.5 0 374 3 1362 1485 KAI9009243.1 hypothetical protein DFJ74DRAFT_687468 [Hyaloraphidium curvatum] diamond 372 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29819084 29819084 PRJNA1160211_S_NODE_15651_length_745_cov_3.288690_g14742_i0 PRJNA1160211 15651 745 3.28869 24.5007405 Obelidium mucronatum 110081 Fungi Fungi 110 1.12e-24   NR KAI9353655.1 110081 g14742 i0 45.5 0.583892617449664 145 71 57.2 3 266 691 158 297 KAI9353655.1 hypothetical protein BDR26DRAFT_848971 [Obelidium mucronatum] diamond 435 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Obelidium Obelidium mucronatum
29901876 29901876 PRJNA1160211_S_NODE_96651_length_464_cov_1.764706_g95426_i0 PRJNA1160211 96651 464 1.764706 8.18823584 Eukaryota 2759 Fungi Fungi 167 1.15e-44   NR KAJ3256036.1 4814 g95426 i0 68.3 7.98491379310345 120 38 77.6 0 462 103 1034 1153 KAJ3256036.1 GMP reductase 2 [Chytriomyces hyalinus] diamond 3705 168 0.994047619047619 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
30059577 30059577 PRJNA1160211_S_NODE_181871_length_332_cov_2.420849_g180638_i0 PRJNA1160211 181871 332 2.420849 8.03721868 Fungi 4751 Fungi Fungi 57 1.44e-7   NR KAI9327329.1 110081 g180638 i0 51 2.74698795180723 51 25 46.1 0 11 163 55 105 KAI9327329.1 hypothetical protein BDR26DRAFT_95433 [Obelidium mucronatum] diamond 912 57.4 0.993031358885017 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Obelidium Obelidium mucronatum
31956168 31956168 PRJNA1160211_S_NODE_44377_length_594_cov_7.374280_g43223_i0 PRJNA1160211 44377 594 7.37428 43.8032232 Opisthokonta 33154 Fungi Fungi 48.5 0.00221   NR KAI9002974.1 82268 g43223 i0 86.4 1 22 3 11.1 0 508 443 82 103 KAI9002974.1 putative zinc-binding domain-containing protein [Hyaloraphidium curvatum] diamond 594 48.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32443517 32443517 PRJNA1160211_S_NODE_64919_length_534_cov_9.401302_g63721_i0 PRJNA1160211 64919 534 9.401302 50.20295268 Hyaloraphidium curvatum 82268 Fungi Fungi 46.6 0.021   NR KAI9004353.1 82268 g63721 i0 41.4 0.325842696629214 58 31 31.5 2 20 187 269 325 KAI9004353.1 hypothetical protein DFJ74DRAFT_713096 [Hyaloraphidium curvatum] diamond 174 46.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32570058 32570058 PRJNA1160211_S_NODE_79479_length_499_cov_17.382629_g78262_i0 PRJNA1160211 79479 499 17.382629 86.73931871 Fimicolochytrium jonesii 1396493 Fungi Fungi 46.2 0.0266   NR XP_052922848.1 1396493 g78262 i0 26.3 0.709418837675351 118 69 61.3 3 88 393 250 365 XP_052922848.1 uncharacterized protein EV422DRAFT_508701 [Fimicolochytrium jonesii] diamond 354 46.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
32620418 32620418 PRJNA1160211_S_NODE_175820_length_340_cov_1.411985_g174587_i0 PRJNA1160211 175820 340 1.411985 4.800749 Eukaryota 2759 Fungi Fungi 118 2.2499999999999993e-31   NR KAJ3123916.1 2732418 g174587 i0 73.8 11.0294117647059 80 21 70.6 0 1 240 44 123 KAJ3123916.1 hypothetical protein HK098_001561 [Nowakowskiella sp. JEL0407] diamond 3750 119 0.991596638655462 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0407

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;