RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1160211" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1160211 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
310244 310244 PRJNA1160211_S_NODE_276361_length_244_cov_2.584795_g275128_i0 PRJNA1160211 276361 244 2.584795 6.3068998 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 180 9.68e-41   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g275128 i0 81.651 1.40163934426229 218 38 89 2 17 233 793786 793570 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 342 180 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
1585493 1585493 PRJNA1160211_S_NODE_91522_length_474_cov_4.206983_g90299_i0 PRJNA1160211 91522 474 4.206983 19.94109942 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 732 0   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g90299 i0 94.538 182.761603375527 476 23 99 3 1 473 891281 890806 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 86629 732 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
4137162 4137162 PRJNA1160211_S_NODE_287504_length_235_cov_3.604938_g286271_i0 PRJNA1160211 287504 235 3.604938 8.4716043 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 144 1.97e-41   NR RAL56550.1 1914866 g286271 i0 98.6 0.94468085106383 74 1 94.5 0 2 223 41 114 RAL56550.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Gracilibacteria bacterium GN02-873] diamond 222 144 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
15066470 15066470 PRJNA1160211_S_NODE_297232_length_214_cov_4.042553_g295999_i0 PRJNA1160211 297232 214 4.042553 8.65106342 Bacteria 2 Bacteria Bacteria 54.7 0.005   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g295999 i0 96.97 15.6682242990654 33 0 15 1 177 208 774596 774628 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 3353 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
16887420 16887420 PRJNA1160211_S_NODE_284034_length_240_cov_3.227545_g282801_i0 PRJNA1160211 284034 240 3.227545 7.746108 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 182 2.64e-41   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g282801 i0 80.579 1.00833333333333 242 42 99 4 1 238 793590 793350 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 242 182 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
21987256 21987256 PRJNA1160211_S_NODE_45858_length_589_cov_25.784884_g44702_i0 PRJNA1160211 45858 589 25.784884 151.87296676 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 734 0   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g44702 i0 90.175 95.7758913412564 570 47 96 9 1 566 890380 889816 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 56412 734 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
28417955 28417955 PRJNA1160211_S_NODE_108746_length_441_cov_2.076087_g107518_i0 PRJNA1160211 108746 441 2.076087 9.15554367 Bacteria 2 Bacteria Bacteria 182 1.79e-50   NR MCH8518297.1 2044595 g107518 i0 67.9 11.6598639455782 134 40 91.2 2 3 404 429 559 MCH8518297.1 DEAD/DEAH box helicase family protein [Candidatus Altimarinota bacterium] diamond 5142 183 0.994535519125683 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29629499 29629499 PRJNA1160211_S_NODE_84510_length_488_cov_67.865060_g83291_i0 PRJNA1160211 84510 488 67.86506 331.1814928 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 129 3.2099999999999996e-31   NR RKW24136.1 2044595 g83291 i0 100 0.418032786885246 68 0 41.8 0 101 304 709 776 RKW24136.1 MAG: DUF5011 domain-containing protein [Candidatus Altimarinota bacterium] diamond 204 129 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30545964 30545964 PRJNA1160211_S_NODE_80413_length_497_cov_11.655660_g79196_i0 PRJNA1160211 80413 497 11.65566 57.9286302 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 140 7.199999999999999e-38   NR MBP7806433.1 2044595 g79196 i0 57.6 0.796780684104628 132 56 79.7 0 474 79 15 146 MBP7806433.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 396 140 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30956886 30956886 PRJNA1160211_S_NODE_75934_length_507_cov_21.481567_g74720_i0 PRJNA1160211 75934 507 21.481567 108.91154469 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 218 1.05e-63   NR MFN7160311.1 2044595 g74720 i0 75.2 1.63905325443787 137 34 81.1 0 493 83 62 198 MFN7160311.1 ATP-binding cassette domain-containing protein [Candidatus Altimarinota bacterium] diamond 831 218 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;