contig_metadata
2 rows where bioproject = "PRJNA1160211" and tax_phylum = "Candidatus Absconditibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24536641 | 24536641 | PRJNA1160211_S_NODE_6700_length_888_cov_25.826994_g6061_i0 | PRJNA1160211 | 6700 | 888 | 25.826994 | 229.34370672 | candidate division SR1 bacterium RAAC1_SR1_1 | 1394709 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|563351663|gb|CP006913.1| | 1394709 | g6061 | i0 | 84.052 | 111.663288288288 | 765 | 108 | 85 | 13 | 114 | 871 | 126399 | 125642 | Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome | blastn | 99157 | 725 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium RAAC1_SR1_1 | ||||||
| 26819019 | 26819019 | PRJNA1160211_S_NODE_169461_length_348_cov_2.240000_g168228_i0 | PRJNA1160211 | 169461 | 348 | 2.24 | 7.7952 | candidate division SR1 bacterium | 2044938 | Bacteria | Bacteria | 107 | 2.07e-26 | NR | PZM85710.1 | 2044938 | g168228 | i0 | 82.8 | 0.551724137931034 | 64 | 11 | 55.2 | 0 | 346 | 155 | 125 | 188 | PZM85710.1 MAG: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [candidate division SR1 bacterium] | diamond | 192 | 107 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;