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contig_metadata

5 rows where bioproject = "PRJNA1160211" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 5 ✖

bioproject 1

  • PRJNA1160211 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4136971 4136971 PRJNA1160211_S_NODE_257604_length_256_cov_1.016393_g256371_i0 PRJNA1160211 257604 256 1.016393 2.60196608 Alphapolyomavirus quintihominis 1891726 Viruses Viruses 468 1.95e-127   NTclustered gi|1606663519|dbj|LC148294.1| 493803 g256371 i0 99.609 100 256 1 100 0 1 256 3873 3618 Merkel cell polyomavirus genes for large T antigen, VP1, VP2, complete cds, strain: JPN-TM-MCC2 blastn 25600 468 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
13791978 13791978 PRJNA1160211_S_NODE_257651_length_256_cov_0.830601_g256418_i0 PRJNA1160211 257651 256 0.830601 2.12633856 root 1 Root_unresolved Root_unresolved 82.4 2.97e-11   NTclustered gi|1836405711|gb|MT138233.1| 1395615 g256418 i0 97.872 0.85546875 47 1 18 0 1 47 30 76 MAG: Parvo-like hybrid virus UC4 isolate cra070par1 genomic sequence blastn 219 82.4 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Nicoomyvirus moldensis
19436635 19436635 PRJNA1160211_S_NODE_64236_length_536_cov_4.989201_g63040_i0 PRJNA1160211 64236 536 4.989201 26.74211736 Alphapolyomavirus quintihominis 1891726 Viruses Viruses 985 0   NTclustered gi|1606663519|dbj|LC148294.1| 493803 g63040 i0 99.813 90.8824626865672 536 1 100 0 1 536 4854 4319 Merkel cell polyomavirus genes for large T antigen, VP1, VP2, complete cds, strain: JPN-TM-MCC2 blastn 48713 985 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
20711520 20711520 PRJNA1160211_S_NODE_258817_length_255_cov_1.098901_g257584_i0 PRJNA1160211 258817 255 1.098901 2.80219755 Betapolyomavirus macacae 1891767 Viruses Viruses 451 1.95e-122   NTclustered gi|13345942|gb|AF332562.1| 1891767 g257584 i0 99.595 112.360784313725 247 1 97 0 1 247 4478 4232 Simian virus 40 strain 777, complete genome blastn 28652 451 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30249533 30249533 PRJNA1160211_S_NODE_77572_length_504_cov_3.116009_g76357_i0 PRJNA1160211 77572 504 3.116009 15.70468536 Viruses 10239 Viruses Viruses 217 3.98e-69   NR QTE03367.1 2815045 g76357 i0 64.2 1.80357142857143 151 52 89.9 1 458 6 19 167 QTE03367.1 MAG: replication-associated protein [Grus japonensis CRESS-DNA-virus sp.] diamond 909 219 0.990867579908676 Viruses   Shotokuvirae Cressdnaviricota         Grus japonensis CRESS-DNA-virus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;