RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1160211", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 1 ✖

tax_kingdom 1

  • Methanobacteriati · 1 ✖

bioproject 1

  • PRJNA1160211 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31430804 31430804 PRJNA1160211_S_NODE_249136_length_262_cov_6.312169_g247903_i0 PRJNA1160211 249136 262 6.312169 16.53788278 Candidatus Poseidoniia archaeon 2666348 Archaea Archaea 41.6 0.022   NR MDP6275084.1 2666348 g247903 i0 40.4 0.595419847328244 52 26 58.4 2 39 191 4 51 MDP6275084.1 hypothetical protein [Candidatus Poseidoniia archaeon] diamond 156 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia       Candidatus Poseidoniia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;