contig_metadata
15 rows where bioproject = "PRJNA1160211" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3589145 | 3589145 | PRJNA1160211_S_NODE_254883_length_258_cov_1.243243_g253650_i0 | PRJNA1160211 | 254883 | 258 | 1.243243 | 3.20756694 | root | 1 | Root_unresolved | Root_unresolved | 80.5 | 1.08e-10 | NTclustered | gi|2874253795|emb|OY969779.1| | 176233 | g253650 | i0 | 92.982 | 34.1627906976744 | 57 | 0 | 22 | 3 | 179 | 235 | 158776 | 158828 | MAG: uncultured Methanobacteriaceae archaeon isolate MFD04716.bin.c.1 genome assembly, chromosome: 1 | blastn | 8814 | 80.5 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | uncultured Methanobacteriaceae archaeon | ||
| 6686916 | 6686916 | PRJNA1160211_S_NODE_109166_length_440_cov_3.708447_g107938_i0 | PRJNA1160211 | 109166 | 440 | 3.708447 | 16.3171668 | uncultured Methanoregula sp. | 1005933 | Archaea | Archaea | 196 | 1.86e-45 | NTclustered | gi|2621785414|emb|OY781872.1| | 1005933 | g107938 | i0 | 82.511 | 4.32954545454545 | 223 | 39 | 51 | 0 | 189 | 411 | 3121383 | 3121605 | MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 | blastn | 1905 | 196 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregula | uncultured Methanoregula sp. | |
| 7416341 | 7416341 | PRJNA1160211_S_NODE_191566_length_320_cov_8.603239_g190333_i0 | PRJNA1160211 | 191566 | 320 | 8.603239 | 27.5303648 | Methanococcus | 2184 | Archaea | Archaea | 121 | 8.11e-23 | NTclustered | gi|2891706660|gb|CP178162.1| | 39152 | g190333 | i0 | 98.529 | 33.45625 | 68 | 1 | 21 | 0 | 234 | 301 | 796799 | 796866 | Methanococcus maripaludis strain LL chromosome, complete genome | blastn | 10706 | 121 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanococcaceae | Methanococcus | Methanococcus maripaludis | |
| 9966185 | 9966185 | PRJNA1160211_S_NODE_100848_length_455_cov_16.837696_g99622_i0 | PRJNA1160211 | 100848 | 455 | 16.837696 | 76.6115168 | Halococcus | 2249 | Archaea | Archaea | 608 | 2.0899999999999995e-169 | NTclustered | gi|2221489803|gb|CP095005.1| | 179637 | g99622 | i0 | 92.111 | 142.863736263736 | 431 | 34 | 95 | 0 | 24 | 454 | 212451 | 212021 | Halococcus dombrowskii strain H4 chromosome, complete genome | blastn | 65003 | 608 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Halococcaceae | Halococcus | Halococcus dombrowskii | |
| 9966706 | 9966706 | PRJNA1160211_S_NODE_240888_length_269_cov_18.295918_g239655_i0 | PRJNA1160211 | 240888 | 269 | 18.295918 | 49.21601942 | Methanocaldococcaceae | 196117 | Archaea | Archaea | 82.4 | 3.14e-11 | NTclustered | gi|2891700162|gb|CP178165.1| | 213231 | g239655 | i0 | 97.872 | 28.5130111524164 | 47 | 1 | 17 | 0 | 22 | 68 | 710545 | 710499 | Methanocaldococcus indicus strain SL43 chromosome, complete genome | blastn | 7670 | 82.4 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanocaldococcaceae | Methanocaldococcus | Methanocaldococcus indicus | |
| 20165431 | 20165431 | PRJNA1160211_S_NODE_90356_length_476_cov_10.434243_g89133_i0 | PRJNA1160211 | 90356 | 476 | 10.434243 | 49.66699668 | Halalkalicoccus | 332246 | Archaea | Archaea | 846 | 0 | NTclustered | gi|507148368|ref|NR_103171.1| | 413810 | g89133 | i0 | 98.739 | 165.321428571429 | 476 | 6 | 100 | 0 | 1 | 476 | 1307 | 832 | Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence | blastn | 78693 | 846 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Halococcaceae | Halalkalicoccus | Halalkalicoccus jeotgali | |
| 22715204 | 22715204 | PRJNA1160211_S_NODE_150558_length_374_cov_2.059801_g149325_i0 | PRJNA1160211 | 150558 | 374 | 2.059801 | 7.70365574 | Methanobacteriaceae | 2159 | Archaea | Archaea | 102 | 3.48e-17 | NTclustered | gi|333824386|gb|CP002772.1| | 868131 | g149325 | i0 | 91.892 | 39.8689839572192 | 74 | 5 | 20 | 1 | 302 | 374 | 814199 | 814126 | Methanobacterium paludis strain SWAN1, complete genome | blastn | 14911 | 102 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobacterium | Methanobacterium paludis | |
| 27533687 | 27533687 | PRJNA1160211_S_NODE_58923_length_550_cov_7.807128_g57739_i0 | PRJNA1160211 | 58923 | 550 | 7.807128 | 42.939204 | root | 1 | Root_unresolved | Root_unresolved | 77 | 8.77e-13 | NR | MBJ35148.1 | 2026739 | g57739 | i0 | 44.7 | 2.04545454545455 | 94 | 43 | 46.4 | 3 | 453 | 199 | 320 | 413 | MBJ35148.1 hypothetical protein [Methanobacteriota archaeon] | diamond | 1125 | 77 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 27861576 | 27861576 | PRJNA1160211_S_NODE_274605_length_245_cov_1.924419_g273372_i0 | PRJNA1160211 | 274605 | 245 | 1.924419 | 4.71482655 | Halospeciosus flavus | 3032283 | Archaea | Archaea | 152 | 1.0299999999999998e-43 | NR | WP_382267974.1 | 3032283 | g273372 | i0 | 88.6 | 0.96734693877551 | 79 | 9 | 96.7 | 0 | 8 | 244 | 38 | 116 | WP_382267974.1 replication initiation factor domain-containing protein [Halospeciosus flavus] | diamond | 237 | 152 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Halobacteriaceae | Halospeciosus | Halospeciosus flavus | |
| 28745766 | 28745766 | PRJNA1160211_S_NODE_12547_length_779_cov_4.957507_g11695_i0 | PRJNA1160211 | 12547 | 779 | 4.957507 | 38.61897953 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 184 | 8.11e-49 | NR | MAD56215.1 | 2026739 | g11695 | i0 | 73.2 | 0.489088575096277 | 127 | 33 | 48.9 | 1 | 778 | 398 | 895 | 1020 | MAD56215.1 hypothetical protein [Methanobacteriota archaeon] | diamond | 381 | 184 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 28935294 | 28935294 | PRJNA1160211_S_NODE_209648_length_300_cov_2.590308_g208415_i0 | PRJNA1160211 | 209648 | 300 | 2.590308 | 7.770924 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 44.3 | 0.00245 | NR | MBN74715.1 | 2026739 | g208415 | i0 | 58.8 | 0.34 | 34 | 14 | 34 | 0 | 28 | 129 | 36 | 69 | MBN74715.1 hypothetical protein [Methanobacteriota archaeon] | diamond | 102 | 44.3 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 30451402 | 30451402 | PRJNA1160211_S_NODE_18893_length_717_cov_15.989130_g17911_i0 | PRJNA1160211 | 18893 | 717 | 15.98913 | 114.6420621 | Halosimplex aquaticum | 3026162 | Archaea | Archaea | 121 | 1.83e-27 | NR | WP_274325319.1 | 3026162 | g17911 | i0 | 30 | 0.97489539748954 | 233 | 152 | 94.6 | 2 | 7 | 684 | 259 | 487 | WP_274325319.1 PAS domain-containing sensor histidine kinase [Halosimplex aquaticum] | diamond | 699 | 121 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Haloarculaceae | Halosimplex | Halosimplex aquaticum | |
| 31430804 | 31430804 | PRJNA1160211_S_NODE_249136_length_262_cov_6.312169_g247903_i0 | PRJNA1160211 | 249136 | 262 | 6.312169 | 16.53788278 | Candidatus Poseidoniia archaeon | 2666348 | Archaea | Archaea | 41.6 | 0.022 | NR | MDP6275084.1 | 2666348 | g247903 | i0 | 40.4 | 0.595419847328244 | 52 | 26 | 58.4 | 2 | 39 | 191 | 4 | 51 | MDP6275084.1 hypothetical protein [Candidatus Poseidoniia archaeon] | diamond | 156 | 41.6 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Candidatus Poseidoniia | Candidatus Poseidoniia archaeon | |||||
| 32190169 | 32190169 | PRJNA1160211_S_NODE_45818_length_590_cov_2.456480_g44662_i0 | PRJNA1160211 | 45818 | 590 | 2.45648 | 14.493232 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 84.7 | 2.93e-15 | NR | RMG30411.1 | 2026739 | g44662 | i0 | 35.8 | 0.823728813559322 | 162 | 90 | 76.8 | 5 | 137 | 589 | 363 | 521 | RMG30411.1 MAG: hypothetical protein D6732_16280 [Methanobacteriota archaeon] | diamond | 486 | 84.7 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 32209463 | 32209463 | PRJNA1160211_S_NODE_126458_length_410_cov_21.916914_g125226_i0 | PRJNA1160211 | 126458 | 410 | 21.916914 | 89.8593474 | root | 1 | Root_unresolved | Root_unresolved | 130 | 4.1e-32 | NR | TLZ55728.1 | 2026739 | g125226 | i0 | 61 | 3.3 | 105 | 40 | 76.1 | 1 | 344 | 33 | 58 | 162 | TLZ55728.1 MAG: PKD domain-containing protein [Methanobacteriota archaeon] | diamond | 1353 | 130 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;