RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1160211", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1160211 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1584002 1584002 PRJNA1160211_S_NODE_153722_length_369_cov_6.496622_g152489_i0 PRJNA1160211 153722 369 6.496622 23.97253518 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.035   NTclustered gi|690843732|emb|LN342000.1| 99802 g152489 i0 100 0.0758807588075881 28 0 8 0 77 104 728 755 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0115234 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
24535909 24535909 PRJNA1160211_S_NODE_238720_length_271_cov_6.131313_g237487_i0 PRJNA1160211 238720 271 6.131313 16.61585823 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|690485518|emb|LN029193.1| 99802 g237487 i0 96.875 0.118081180811808 32 0 11 1 90 120 281 312 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0028633 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
31051752 31051752 PRJNA1160211_S_NODE_25115_length_678_cov_2.957025_g24053_i0 PRJNA1160211 25115 678 2.957025 20.0486295 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 77 1.56e-12   NR VDL81010.1 70667 g24053 i0 42.6 1.34955752212389 101 56 43.8 1 675 379 234 334 VDL81010.1 unnamed protein product [Schistocephalus solidus] diamond 915 77 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;