RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1160211" and tax_clade = "Provora"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Provora · 2 ✖

bioproject 1

  • PRJNA1160211 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1584999 1584999 PRJNA1160211_S_NODE_297642_length_212_cov_5.251799_g296409_i0 PRJNA1160211 297642 212 5.251799 11.13381388 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 80.5 8.55e-11   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g296409 i0 100 20.688679245283 43 0 20 0 170 212 7087 7045 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 4386 80.5 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
4136035 4136035 PRJNA1160211_S_NODE_135244_length_396_cov_45.390093_g134012_i0 PRJNA1160211 135244 396 45.390093 179.74476828 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 254 9.68e-63   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g134012 i0 83.391 73.479797979798 289 33 72 10 4 290 6805 6530 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 29098 254 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;