contig_metadata
13 rows where bioproject = "PRJNA1160211", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2860179 | 2860179 | PRJNA1160211_S_NODE_148803_length_376_cov_8.016502_g147570_i0 | PRJNA1160211 | 148803 | 376 | 8.016502 | 30.14204752 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 398 | 3.989999999999999e-106 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g147570 | i0 | 87.123 | 22.6436170212766 | 365 | 30 | 95 | 14 | 1 | 356 | 3486044 | 3485688 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 8514 | 398 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 4136962 | 4136962 | PRJNA1160211_S_NODE_255784_length_257_cov_2.070652_g254551_i0 | PRJNA1160211 | 255784 | 257 | 2.070652 | 5.32157564 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 368 | 2.04e-97 | NTclustered | gi|2874254163|emb|OY970395.1| | 412054 | g254551 | i0 | 93.902 | 154.31906614786 | 246 | 11 | 94 | 2 | 1 | 242 | 1605920 | 1606165 | MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 | blastn | 39660 | 368 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5412438 | 5412438 | PRJNA1160211_S_NODE_162385_length_357_cov_7.112676_g161152_i0 | PRJNA1160211 | 162385 | 357 | 7.1126760000000004 | 25.39225332 | uncultured Gemmatimonas sp. | 221169 | Bacteria | Bacteria | 104 | 9.2e-18 | NTclustered | gi|219811339|gb|FJ551553.1| | 221169 | g161152 | i0 | 96.774 | 1.26330532212885 | 62 | 2 | 17 | 0 | 41 | 102 | 415 | 476 | Uncultured Gemmatimonas sp. clone LTSP_BACT_P3M06 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 451 | 104 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | uncultured Gemmatimonas sp. | |
| 6688322 | 6688322 | PRJNA1160211_S_NODE_30906_length_647_cov_58.663763_g29809_i0 | PRJNA1160211 | 30906 | 647 | 58.663763 | 379.55454661 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 737 | 0 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g29809 | i0 | 88.728 | 103.375579598145 | 621 | 47 | 94 | 9 | 27 | 629 | 1903999 | 1903384 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 66884 | 737 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10512917 | 10512917 | PRJNA1160211_S_NODE_128589_length_407_cov_4.508982_g127357_i0 | PRJNA1160211 | 128589 | 407 | 4.508982 | 18.35155674 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 394 | 5.63e-105 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g127357 | i0 | 85.602 | 96.8255528255528 | 382 | 47 | 93 | 8 | 22 | 399 | 420754 | 421131 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 39408 | 394 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10514017 | 10514017 | PRJNA1160211_S_NODE_291929_length_229_cov_2.294872_g290696_i0 | PRJNA1160211 | 291929 | 229 | 2.294872 | 5.25525688 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 97.1 | 9.31e-16 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g290696 | i0 | 96.552 | 188.096069868996 | 58 | 2 | 25 | 0 | 170 | 227 | 173050 | 173107 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 43074 | 97.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15612773 | 15612773 | PRJNA1160211_S_NODE_240313_length_270_cov_2.345178_g239080_i0 | PRJNA1160211 | 240313 | 270 | 2.345178 | 6.3319806 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 431 | 2.719999999999999e-116 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g239080 | i0 | 95.556 | 28.6518518518519 | 270 | 11 | 100 | 1 | 1 | 270 | 3044622 | 3044354 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 7736 | 431 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18162107 | 18162107 | PRJNA1160211_S_NODE_44035_length_595_cov_8.840996_g42881_i0 | PRJNA1160211 | 44035 | 595 | 8.840996 | 52.6039262 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g42881 | i0 | 88.307 | 282.773109243697 | 573 | 49 | 96 | 14 | 24 | 592 | 3042739 | 3043297 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 168250 | 671 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 27451486 | 27451486 | PRJNA1160211_S_NODE_263263_length_251_cov_2.511236_g262030_i0 | PRJNA1160211 | 263263 | 251 | 2.511236 | 6.30320236 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 100 | 4.63e-25 | NR | MDQ2768724.1 | 2026742 | g262030 | i0 | 65.4 | 0.932270916334661 | 78 | 18 | 82.5 | 1 | 25 | 231 | 30 | 107 | MDQ2768724.1 DEAD/DEAH box helicase [Gemmatimonadota bacterium] | diamond | 234 | 100 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28859663 | 28859663 | PRJNA1160211_S_NODE_130268_length_404_cov_7.921450_g129036_i0 | PRJNA1160211 | 130268 | 404 | 7.92145 | 32.002658 | Bacteria | 2 | Bacteria | Bacteria | 169 | 4.58e-46 | NR | MFH1571213.1 | 2026742 | g129036 | i0 | 75.2 | 19.3514851485149 | 121 | 24 | 89.9 | 1 | 6 | 368 | 312 | 426 | MFH1571213.1 AAA family ATPase [Gemmatimonadota bacterium] | diamond | 7818 | 169 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30325330 | 30325330 | PRJNA1160211_S_NODE_23112_length_689_cov_9.730519_g22078_i0 | PRJNA1160211 | 23112 | 689 | 9.730519 | 67.04327591 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 197 | 1.88e-60 | NR | HKU60607.1 | 2448054 | g22078 | i0 | 60.8 | 2.61683599419448 | 148 | 56 | 64.4 | 1 | 644 | 201 | 9 | 154 | HKU60607.1 GNAT family N-acetyltransferase [Gemmatimonadales bacterium] | diamond | 1803 | 197 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30502075 | 30502075 | PRJNA1160211_S_NODE_256353_length_257_cov_0.891304_g255120_i0 | PRJNA1160211 | 256353 | 257 | 0.891304 | 2.29065128 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 80.5 | 1.98e-15 | NR | NUP54222.1 | 2026741 | g255120 | i0 | 57.3 | 5.94163424124514 | 75 | 31 | 87.5 | 1 | 27 | 251 | 164 | 237 | NUP54222.1 ATP-binding protein [Gemmatimonadaceae bacterium] | diamond | 1527 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31323571 | 31323571 | PRJNA1160211_S_NODE_111895_length_435_cov_5.395028_g110666_i0 | PRJNA1160211 | 111895 | 435 | 5.395028 | 23.4683718 | Bacteria | 2 | Bacteria | Bacteria | 153 | 4.57e-41 | NR | HEU4585318.1 | 2026741 | g110666 | i0 | 57.6 | 8.62068965517241 | 125 | 53 | 86.2 | 0 | 9 | 383 | 359 | 483 | HEU4585318.1 AlkA N-terminal domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 3750 | 154 | 0.993506493506494 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;