RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1160211", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1160211 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26628816 26628816 PRJNA1160211_S_NODE_18001_length_724_cov_14.462366_g17039_i0 PRJNA1160211 18001 724 14.462366 104.70752984 Chlorobiota bacterium 2268192 Bacteria Bacteria 113 1.61e-25   NR MDB5036186.1 2268192 g17039 i0 49.6 1.06906077348066 127 61 52.6 1 421 41 4 127 MDB5036186.1 efflux transporter, family, subunit [Chlorobiota bacterium] diamond 774 113 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
30798609 30798609 PRJNA1160211_S_NODE_56294_length_558_cov_2.092784_g55117_i0 PRJNA1160211 56294 558 2.092784 11.67773472 Chlorobiaceae bacterium 2067991 Bacteria Bacteria 159 5.969999999999998e-42   NR NMW17687.1 2067991 g55117 i0 55 0.919354838709677 171 75 90.9 1 536 30 184 354 NMW17687.1 DUF4214 domain-containing protein [Chlorobiaceae bacterium] diamond 513 159 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;