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contig_metadata

22 rows where bioproject = "PRJNA1160211", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 22 ✖

tax_clade 1

  • Discoba · 22 ✖

bioproject 1

  • PRJNA1160211 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
309639 309639 PRJNA1160211_S_NODE_188521_length_324_cov_2.633466_g187288_i0 PRJNA1160211 188521 324 2.633466 8.53242984 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 542 1.48e-149   NTclustered gi|11466174|ref|NC_002573.1| 5762 g187288 i0 99.007 48.3456790123457 302 3 93 0 23 324 2473 2774 Naegleria gruberi mitochondrion, complete genome blastn 15664 542 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2859995 2859995 PRJNA1160211_S_NODE_126163_length_411_cov_3.739645_g124932_i0 PRJNA1160211 126163 411 3.739645 15.36994095 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 736 0   NTclustered gi|529154115|gb|EU266548.2| 500012 g124932 i0 99.029 71.1727493917275 412 0 100 4 1 411 517 925 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 29252 736 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
2860053 2860053 PRJNA1160211_S_NODE_134963_length_397_cov_3.787037_g133731_i0 PRJNA1160211 134963 397 3.787037 15.03453689 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 640 6.379999999999999e-179   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g133731 i0 97.34 26.191435768262 376 10 95 0 19 394 1850 2225 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10398 640 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4135833 4135833 PRJNA1160211_S_NODE_109704_length_439_cov_3.978142_g108475_i0 PRJNA1160211 109704 439 3.978142 17.46404338 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 767 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g108475 i0 98.178 9.12072892938497 439 8 100 0 1 439 1638 1200 Naegleria gruberi mitochondrion, complete genome blastn 4004 767 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5412077 5412077 PRJNA1160211_S_NODE_1125_length_1365_cov_12.097523_g898_i0 PRJNA1160211 1125 1365 12.097523 165.13118895 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1991 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g898 i0 93.348 23.8351648351648 1353 80 99 8 1 1348 3376 2029 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32535 1991 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
6687393 6687393 PRJNA1160211_S_NODE_16826_length_734_cov_17.692890_g15893_i0 PRJNA1160211 16826 734 17.69289 129.8658126 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1083 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g15893 i0 94.242 18.2683923705722 712 36 97 5 1 711 4479 3772 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13409 1083 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
6688732 6688732 PRJNA1160211_S_NODE_82786_length_492_cov_6.317422_g81567_i0 PRJNA1160211 82786 492 6.317422 31.08171624 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 904 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g81567 i0 99.797 108.900406504065 492 1 100 0 1 492 502 993 Naegleria gruberi mitochondrion, complete genome blastn 53579 904 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9237069 9237069 PRJNA1160211_S_NODE_12528_length_779_cov_8.502833_g11676_i0 PRJNA1160211 12528 779 8.502833 66.23706907 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 167 2.67e-36   NTclustered gi|2233316042|emb|OW569396.1| 166959 g11676 i0 82.039 15.5121951219512 206 28 25 7 19 216 21017 20813 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 12084 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
9967017 9967017 PRJNA1160211_S_NODE_49368_length_578_cov_5.796040_g48207_i0 PRJNA1160211 49368 578 5.79604 33.5011112 Naegleria 5761 Heterolobosea other_Eukaryota 806 0   NTclustered gi|2651357780|gb|PP174296.1| 36333 g48207 i0 100 66.1851211072664 436 0 87 0 1 436 1217 1652 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38255 809 0.996291718170581 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
11241535 11241535 PRJNA1160211_S_NODE_160909_length_359_cov_8.713287_g159676_i0 PRJNA1160211 160909 359 8.713287 31.28070033 Naegleria 5761 Heterolobosea other_Eukaryota 143 1.96e-29   NTclustered gi|2618963742|gb|OR769034.1| 5762 g159676 i0 87.805 22.3203342618384 123 14 53 1 10 132 5178 5057 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8013 143 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11788547 11788547 PRJNA1160211_S_NODE_228550_length_281_cov_1.932692_g227317_i0 PRJNA1160211 228550 281 1.932692 5.43086452 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 104 7.05e-18   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g227317 i0 80.882 5.33096085409253 136 23 48 1 1 136 4270 4138 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1498 104 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
15065887 15065887 PRJNA1160211_S_NODE_130892_length_403_cov_11.906061_g129660_i0 PRJNA1160211 130892 403 11.906061 47.98142583 Naegleria 5761 Heterolobosea other_Eukaryota 702 0   NTclustered gi|165968557|gb|EU377597.1| 36333 g129660 i0 100 94.3374689826303 380 0 94 0 24 403 108 487 Naegleria clarki strain CRIB43 18S ribosomal RNA gene, partial sequence blastn 38018 702 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
15612551 15612551 PRJNA1160211_S_NODE_209693_length_300_cov_2.334802_g208460_i0 PRJNA1160211 209693 300 2.334802 7.004406 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 427 3.97e-115   NTclustered gi|11466174|ref|NC_002573.1| 5762 g208460 i0 93.972 0.94 282 17 94 0 19 300 221 502 Naegleria gruberi mitochondrion, complete genome blastn 282 427 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16886420 16886420 PRJNA1160211_S_NODE_1434_length_1282_cov_12.642680_g898_i1 PRJNA1160211 1434 1282 12.64268 162.0791576 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1916 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g898 i1 94.141 24.0491419656786 1263 67 98 5 23 1282 2118 3376 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30831 1916 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16887480 16887480 PRJNA1160211_S_NODE_296174_length_218_cov_4.055172_g294941_i0 PRJNA1160211 296174 218 4.055172 8.84027496 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 291 3.75e-74   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g294941 i0 97.647 16.4587155963303 170 2 77 1 23 190 3602 3771 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3588 291 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
21985948 21985948 PRJNA1160211_S_NODE_136098_length_395_cov_5.906832_g134866_i0 PRJNA1160211 136098 395 5.906832 23.3319864 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 364 4.269999999999998e-96   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g134866 i0 83.541 31.5620253164557 401 54 100 11 1 395 3931 4325 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12467 364 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
27893186 27893186 PRJNA1160211_S_NODE_46405_length_588_cov_3.165049_g45249_i0 PRJNA1160211 46405 588 3.165049 18.61048812 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 51.2 9.41e-4   NR CAG4708713.1 5763 g45249 i0 30.9 1.25510204081633 123 67 55.6 5 3 329 387 505 CAG4708713.1 unnamed protein product [Naegleria fowleri] diamond 738 51.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29250763 29250763 PRJNA1160211_S_NODE_128949_length_406_cov_19.576577_g127717_i0 PRJNA1160211 128949 406 19.576577 79.48090262 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 118 6.18e-30   NR XP_002678658.1 5762 g127717 i0 63.3 1.44827586206897 90 33 66.5 0 16 285 145 234 XP_002678658.1 proteasome subunit alpha [Naegleria gruberi] diamond 588 118 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29345765 29345765 PRJNA1160211_S_NODE_41069_length_605_cov_19.706767_g39926_i0 PRJNA1160211 41069 605 19.706767 119.22594035 Acrasis kona 1008807 Heterolobosea other_Eukaryota 103 6.84e-22   NR KAL0490088.1 1008807 g39926 i0 28.1 1.35867768595041 274 112 93.7 7 572 6 1 274 KAL0490088.1 E3 ubiquitin-protein ligase HECTD [Acrasis kona] diamond 822 103 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30577302 30577302 PRJNA1160211_S_NODE_27673_length_663_cov_35.396610_g26589_i0 PRJNA1160211 27673 663 35.39661 234.6795243 Acrasis kona 1008807 Heterolobosea other_Eukaryota 199 1.34e-61   NR KAL0482313.1 1008807 g26589 i0 62.8 4.40723981900453 156 57 70.6 1 61 528 5 159 KAL0482313.1 peroxiredoxin [Acrasis kona] diamond 2922 199 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31102227 31102227 PRJNA1160211_S_NODE_14695_length_754_cov_4.745962_g13797_i0 PRJNA1160211 14695 754 4.745962 35.78455348 root 1 Root_unresolved Root_unresolved 58.9 6.78e-6   NR XP_002670115.1 5762 g13797 i0 44.3 0.942970822281167 79 39 31.4 2 239 3 553 626 XP_002670115.1 uncharacterized protein NAEGRDRAFT_74930 [Naegleria gruberi] diamond 711 58.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32146165 32146165 PRJNA1160211_S_NODE_235158_length_275_cov_1.311881_g233925_i0 PRJNA1160211 235158 275 1.311881 3.60767275 root 1 Root_unresolved Root_unresolved 66.6 7.29e-12   NR KAL0482349.1 1008807 g233925 i0 43.1 3.43636363636364 65 37 70.9 0 1 195 40 104 KAL0482349.1 thioredoxin [Acrasis kona] diamond 945 66.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;