RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1159911" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1159911 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26616459 26616459 PRJNA1159911_P_NODE_99881_length_242_cov_0.911243_g99339_i0 PRJNA1159911 99881 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 127 6.039999999999998e-32   NR HYW97881.1 3047550 g99339 i0 74.4 8.10743801652893 82 19 99.2 1 242 3 318 399 HYW97881.1 M1 family aminopeptidase [Candidatus Elarobacter sp.] diamond 1962 127 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.
28840383 28840383 PRJNA1159911_P_NODE_83948_length_256_cov_1.169399_g83406_i0 PRJNA1159911 83948 256 1.169399 2.99366144 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 105 3.7e-24   NR HTA56525.1 2952909 g83406 i0 65.1 0.97265625 83 29 97.3 0 3 251 2287 2369 HTA56525.1 Ig-like domain-containing protein [Candidatus Baltobacteraceae bacterium] diamond 249 105 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
29660972 29660972 PRJNA1159911_P_NODE_79950_length_263_cov_1.210526_g79408_i0 PRJNA1159911 79950 263 1.210526 3.18368338 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 62.4 1.61e-10   NR HTA58290.1 2952909 g79408 i0 89.7 0.330798479087452 29 3 33.1 0 89 3 36 64 HTA58290.1 hypothetical protein [Candidatus Baltobacteraceae bacterium] diamond 87 62.4 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;