RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA1159911" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1159911 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7962133 7962133 PRJNA1159911_P_NODE_98847_length_242_cov_2.118343_g98305_i0 PRJNA1159911 98847 242 2.118343 5.12639006 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 4.97e-29   NR CEO96711.1 37360 g98305 i0 72.5 9.91735537190083 80 20 99.2 1 1 240 5 82 CEO96711.1 hypothetical protein PBRA_005315 [Plasmodiophora brassicae] diamond 2400 115 0.991304347826087 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
10511314 10511314 PRJNA1159911_P_NODE_34429_length_447_cov_1.652406_g33888_i0 PRJNA1159911 34429 447 1.652406 7.3862548200000004 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 213 8.16e-67   NR CEP01968.1 37360 g33888 i0 72.2 5.7986577181208 144 38 96.6 1 432 1 1 142 CEP01968.1 hypothetical protein PBRA_002233 [Plasmodiophora brassicae] diamond 2592 213 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
13061194 13061194 PRJNA1159911_P_NODE_29491_length_497_cov_2.129717_g28951_i0 PRJNA1159911 29491 497 2.129717 10.58469349 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 189 1.55e-57   NR CEO98386.1 37360 g28951 i0 78.9 1.55734406438632 128 27 77.3 0 496 113 39 166 CEO98386.1 hypothetical protein PBRA_006500 [Plasmodiophora brassicae] diamond 774 189 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
15610521 15610521 PRJNA1159911_P_NODE_39273_length_407_cov_3.595808_g38731_i0 PRJNA1159911 39273 407 3.595808 14.63493856 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 187 2.86e-58   NR CEP02737.1 37360 g38731 i0 66.7 2.95577395577396 135 45 99.5 0 2 406 12 146 CEP02737.1 hypothetical protein PBRA_002705 [Plasmodiophora brassicae] diamond 1203 187 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
26818980 26818980 PRJNA1159911_P_NODE_27941_length_516_cov_2.433409_g27401_i0 PRJNA1159911 27941 516 2.433409 12.55639044 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.05e-9   NR CEO99081.1 37360 g27401 i0 63.4 0.238372093023256 41 15 23.8 0 514 392 102 142 CEO99081.1 hypothetical protein PBRA_007195 [Plasmodiophora brassicae] diamond 123 64.7 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28966914 28966914 PRJNA1159911_P_NODE_66028_length_293_cov_1.777273_g65486_i0 PRJNA1159911 66028 293 1.777273 5.20740989 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 65.1 1.27e-11   NR CEO99669.1 37360 g65486 i0 66 0.972696245733788 50 17 51.2 0 289 140 16 65 CEO99669.1 hypothetical protein PBRA_007402 [Plasmodiophora brassicae] diamond 285 65.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29144244 29144244 PRJNA1159911_P_NODE_90429_length_248_cov_2.325714_g89887_i0 PRJNA1159911 90429 248 2.325714 5.76777072 Plasmodiophorida 37357 SAR_Eukaryotes SAR_Eukaryotes 90.1 8.57e-21   NR CEP02236.1 37360 g89887 i0 57.9 12.1209677419355 76 32 91.9 0 233 6 1 76 CEP02236.1 hypothetical protein PBRA_002501 [Plasmodiophora brassicae] diamond 3006 90.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30325297 30325297 PRJNA1159911_P_NODE_35072_length_441_cov_2.260870_g34530_i0 PRJNA1159911 35072 441 2.26087 9.9704367 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 84.7 3.52e-18   NR CEP02593.1 37360 g34530 i0 62.1 0.448979591836735 66 25 44.9 0 14 211 37 102 CEP02593.1 hypothetical protein PBRA_002561 [Plasmodiophora brassicae] diamond 198 84.7 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31620565 31620565 PRJNA1159911_P_NODE_66876_length_291_cov_1.463303_g66334_i0 PRJNA1159911 66876 291 1.463303 4.25821173 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 126 3.999999999999999e-33   NR CEO97280.1 37360 g66334 i0 64.6 3.8659793814433 96 34 99 0 289 2 100 195 CEO97280.1 hypothetical protein PBRA_000625 [Plasmodiophora brassicae] diamond 1125 126 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31715492 31715492 PRJNA1159911_P_NODE_60717_length_308_cov_2.191489_g60175_i0 PRJNA1159911 60717 308 2.191489 6.7497861199999996 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 128 5.8099999999999985e-34   NR CEO96095.1 37360 g60175 i0 53.5 0.983766233766234 101 47 98.4 0 5 307 125 225 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 303 128 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32683296 32683296 PRJNA1159911_P_NODE_77580_length_267_cov_2.072165_g77038_i0 PRJNA1159911 77580 267 2.072165 5.53268055 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0131   NR SPR00725.1 37360 g77038 i0 32.8 2.74157303370787 64 42 70.8 1 5 193 245 308 SPR00725.1 unnamed protein product [Plasmodiophora brassicae] diamond 732 44.3 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;