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contig_metadata

29 rows where bioproject = "PRJNA1159911", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 29 ✖

tax_phylum 1

  • Chloroflexota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1159911 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1583089 1583089 PRJNA1159911_P_NODE_75802_length_271_cov_1.333333_g75260_i0 PRJNA1159911 75802 271 1.333333 3.61333243 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 182 3.04e-41   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g75260 i0 82.381 33.7675276752768 210 36 77 1 1 209 11221296 11221087 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 9151 182 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
1583521 1583521 PRJNA1159911_P_NODE_97002_length_244_cov_0.900585_g96460_i0 PRJNA1159911 97002 244 0.900585 2.1974274 Anaerolineae bacterium 2052143 Bacteria Bacteria 110 5.440000000000001e-27   NR HUX77507.1 2052143 g96460 i0 67.5 1.9672131147541 80 26 98.4 0 242 3 141 220 HUX77507.1 pyridoxal-phosphate dependent enzyme [Anaerolineae bacterium] diamond 480 110 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
6685823 6685823 PRJNA1159911_P_NODE_50006_length_347_cov_1.649635_g49464_i0 PRJNA1159911 50006 347 1.649635 5.72423345 FCB group 1783270 Bacteria Bacteria 191 1.9499999999999998e-54   NR MCA9963723.1 2073117 g49464 i0 78.1 8.89625360230548 114 25 98.6 0 5 346 441 554 MCA9963723.1 NADP-dependent isocitrate dehydrogenase [Anaerolineales bacterium] diamond 3087 191 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
6685934 6685934 PRJNA1159911_P_NODE_56146_length_323_cov_2.132000_g55604_i0 PRJNA1159911 56146 323 2.132 6.88636 Caldilineaceae bacterium 2614250 Bacteria Bacteria 179 2.57e-50   NR MEZ4711006.1 2614250 g55604 i0 79.2 5.93498452012384 106 22 98.5 0 320 3 405 510 MEZ4711006.1 NADP-dependent isocitrate dehydrogenase [Caldilineaceae bacterium] diamond 1917 179 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
6686234 6686234 PRJNA1159911_P_NODE_6_length_44195_cov_5.389194_g5_i0 PRJNA1159911 6 44195 5.389194 2381.7542883 Bacteria 2 Bacteria Bacteria 2131 0   NR MDQ6673652.1 2026724 g5 i0 54.2 0.288629935513067 2131 915 14.2 14 33606 39869 24 2136 MDQ6673652.1 SDR family NAD(P)-dependent oxidoreductase [Chloroflexota bacterium] diamond 12756 2144 0.993936567164179 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
6686777 6686777 PRJNA1159911_P_NODE_96406_length_244_cov_1.128655_g95864_i0 PRJNA1159911 96406 244 1.128655 2.7539182 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 52.8 0.022   NTclustered gi|2621706198|emb|OY764542.1| 2026734 g95864 i0 100 0.114754098360656 28 0 11 0 28 55 246743 246770 MAG: Dehalococcoidia bacterium isolate 6a5b5718-e0ca-4583-9154-875545b380e3 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
10512010 10512010 PRJNA1159911_P_NODE_67809_length_289_cov_1.375000_g67267_i0 PRJNA1159911 67809 289 1.375 3.97375 Chloroflexota bacterium 2026724 Bacteria Bacteria 163 2.86e-45   NR HZO26619.1 2026724 g67267 i0 77.1 0.996539792387543 96 19 99.7 1 2 289 144 236 HZO26619.1 alpha-amylase family glycosyl hydrolase [Chloroflexota bacterium] diamond 288 163 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
23990275 23990275 PRJNA1159911_P_NODE_89379_length_249_cov_1.573864_g88837_i0 PRJNA1159911 89379 249 1.573864 3.91892136 Anaerolinea sp. 1872519 Bacteria Bacteria 103 4.77e-25   NR MBA3876018.1 1872519 g88837 i0 96.6 0.698795180722892 58 2 69.9 0 176 3 1 58 MBA3876018.1 oxidoreductase [Anaerolinea sp.] diamond 174 103 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
26850684 26850684 PRJNA1159911_P_NODE_55901_length_324_cov_1.768924_g55359_i0 PRJNA1159911 55901 324 1.768924 5.73131376 Chloroflexota bacterium 2026724 Bacteria Bacteria 192 1.7099999999999998e-55   NR MCL4486677.1 2026724 g55359 i0 88.8 0.990740740740741 107 12 99.1 0 323 3 187 293 MCL4486677.1 cytochrome c [Chloroflexota bacterium] diamond 321 192 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27103461 27103461 PRJNA1159911_P_NODE_63282_length_301_cov_1.013158_g62740_i0 PRJNA1159911 63282 301 1.013158 3.04960558 Chloroflexota bacterium 2026724 Bacteria Bacteria 181 1.63e-50   NR MCL4488403.1 2026724 g62740 i0 89 0.996677740863787 100 11 99.7 0 301 2 83 182 MCL4488403.1 CusA/CzcA family heavy metal efflux RND transporter [Chloroflexota bacterium] diamond 300 181 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28019686 28019686 PRJNA1159911_P_NODE_100065_length_242_cov_0.911243_g99523_i0 PRJNA1159911 100065 242 0.911243 2.20520806 Anaerolinea sp. 1872519 Bacteria Bacteria 168 3.21e-48   NR MBA3875342.1 1872519 g99523 i0 97.5 0.991735537190083 80 2 99.2 0 241 2 37 116 MBA3875342.1 GNAT family N-acetyltransferase [Anaerolinea sp.] diamond 240 168 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
28146059 28146059 PRJNA1159911_P_NODE_98445_length_243_cov_0.905882_g97903_i0 PRJNA1159911 98445 243 0.905882 2.20129326 Chloroflexota bacterium 2026724 Bacteria Bacteria 95.1 6.37e-22   NR HEV8633443.1 2026724 g97903 i0 64.9 1.92592592592593 77 26 95.1 1 3 233 46 121 HEV8633443.1 N-acetylmuramoyl-L-alanine amidase [Chloroflexota bacterium] diamond 468 95.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28303707 28303707 PRJNA1159911_P_NODE_7426_length_1252_cov_3.543681_g7087_i0 PRJNA1159911 7426 1252 3.543681 44.36688612 Anaerolineales bacterium 2073117 Bacteria Bacteria 322 2.12e-97   NR HND47414.1 2073117 g7087 i0 52.5 1.03993610223642 434 136 99.9 9 1251 1 98 478 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 1302 322 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28796427 28796427 PRJNA1159911_P_NODE_58047_length_317_cov_1.262295_g57505_i0 PRJNA1159911 58047 317 1.262295 4.00147515 Bacteria 2 Bacteria Bacteria 174 1.7e-50   NR HXH65969.1 2952938 g57505 i0 86.7 2.97160883280757 105 14 99.4 0 316 2 59 163 HXH65969.1 trigger factor [Candidatus Limnocylindrales bacterium] diamond 942 174 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
28840368 28840368 PRJNA1159911_P_NODE_36768_length_427_cov_2.598870_g36226_i0 PRJNA1159911 36768 427 2.59887 11.0971749 Anaerolineales bacterium 2073117 Bacteria Bacteria 194 1.6699999999999998e-54   NR HND47414.1 2073117 g36226 i0 65.5 0.997658079625293 142 49 99.8 0 426 1 544 685 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 426 194 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29093206 29093206 PRJNA1159911_P_NODE_102268_length_237_cov_2.506098_g101726_i0 PRJNA1159911 102268 237 2.506098 5.93945226 Ktedonobacter racemifer 363277 Bacteria Bacteria 83.6 2.38e-17   NR WP_007916255.1 363277 g101726 i0 59 2.9620253164557 78 32 98.7 0 2 235 21 98 WP_007916255.1 glucose 1-dehydrogenase [Ktedonobacter racemifer] diamond 702 83.6 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae Ktedonobacter Ktedonobacter racemifer
29648734 29648734 PRJNA1159911_P_NODE_81990_length_259_cov_1.473118_g81448_i0 PRJNA1159911 81990 259 1.473118 3.81537562 Bacteria 2 Bacteria Bacteria 42.7 0.0464   NR HNS64012.1 2024896 g81448 i0 30.6 1.66795366795367 72 44 76.4 1 216 19 301 372 HNS64012.1 diguanylate cyclase [Anaerolineaceae bacterium] diamond 432 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
29787505 29787505 PRJNA1159911_P_NODE_45851_length_367_cov_1.557823_g45309_i0 PRJNA1159911 45851 367 1.557823 5.71721041 Chloroflexota bacterium 2026724 Bacteria Bacteria 226 2.17e-71   NR HXI15985.1 2026724 g45309 i0 100 0.989100817438692 121 0 98.9 0 3 365 4 124 HXI15985.1 IS630 family transposase [Chloroflexota bacterium] diamond 363 226 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29787517 29787517 PRJNA1159911_P_NODE_83111_length_257_cov_1.673913_g82569_i0 PRJNA1159911 83111 257 1.673913 4.30195641 Chloroflexota bacterium 2026724 Bacteria Bacteria 92.4 5.63e-20   NR HXI18558.1 2026724 g82569 i0 100 0.501945525291829 43 0 50.2 0 2 130 316 358 HXI18558.1 prolyl oligopeptidase family serine peptidase [Chloroflexota bacterium] diamond 129 92.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30217609 30217609 PRJNA1159911_P_NODE_34152_length_449_cov_3.199468_g33611_i0 PRJNA1159911 34152 449 3.199468 14.36561132 Bacteria 2 Bacteria Bacteria 88.6 1.58e-18   NR MDR3577735.1 2024896 g33611 i0 59.7 2.89977728285078 62 25 41.4 0 3 188 146 207 MDR3577735.1 uracil phosphoribosyltransferase [Anaerolineaceae bacterium] diamond 1302 88.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
30419882 30419882 PRJNA1159911_P_NODE_88353_length_250_cov_0.870056_g87811_i0 PRJNA1159911 88353 250 0.870056 2.17514 Chloroflexota bacterium 2026724 Bacteria Bacteria 133 2.07e-34   NR HEY3083257.1 2026724 g87811 i0 73.5 2.988 83 21 99.6 1 2 250 297 378 HEY3083257.1 N,N-dimethylformamidase beta subunit family domain-containing protein [Chloroflexota bacterium] diamond 747 133 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30861883 30861883 PRJNA1159911_P_NODE_92414_length_247_cov_0.885057_g91872_i0 PRJNA1159911 92414 247 0.885057 2.18609079 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 117 1.27e-28   NR HXR65535.1 2740538 g91872 i0 63.4 0.995951417004049 82 30 99.6 0 247 2 217 298 HXR65535.1 catalase [Ktedonobacteraceae bacterium] diamond 246 117 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
31240922 31240922 PRJNA1159911_P_NODE_88775_length_250_cov_0.870056_g88233_i0 PRJNA1159911 88775 250 0.870056 2.17514 Chloroflexota bacterium 2026724 Bacteria Bacteria 70.9 4.4e-12   NR MCC7366845.1 2026724 g88233 i0 85.3 0.816 34 5 40.8 0 250 149 347 380 MCC7366845.1 galactonate dehydratase [Chloroflexota bacterium] diamond 204 70.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31367784 31367784 PRJNA1159911_P_NODE_94116_length_246_cov_0.890173_g93574_i0 PRJNA1159911 94116 246 0.890173 2.18982558 Anaerolinea sp. 1872519 Bacteria Bacteria 148 1.26e-39   NR MBA3876355.1 1872519 g93574 i0 97.5 0.963414634146341 79 2 96.3 0 1 237 539 617 MBA3876355.1 hypothetical protein [Anaerolinea sp.] diamond 237 148 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
31399368 31399368 PRJNA1159911_P_NODE_99036_length_242_cov_1.639053_g98494_i0 PRJNA1159911 99036 242 1.639053 3.96650826 Chloroflexota bacterium 2026724 Bacteria Bacteria 163 1.9799999999999998e-47   NR HXI15985.1 2026724 g98494 i0 100 0.991735537190083 80 0 99.2 0 242 3 150 229 HXI15985.1 IS630 family transposase [Chloroflexota bacterium] diamond 240 163 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31589156 31589156 PRJNA1159911_P_NODE_59336_length_312_cov_33.682008_g58794_i0 PRJNA1159911 59336 312 33.682008 105.08786496 Chloroflexota bacterium 2026724 Bacteria Bacteria 45.1 0.0115   NR TME07510.1 2026724 g58794 i0 35.6 0.567307692307692 59 38 56.7 0 63 239 196 254 TME07510.1 MAG: ATP-NAD kinase [Chloroflexota bacterium] diamond 177 45.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31589158 31589158 PRJNA1159911_P_NODE_7076_length_1288_cov_5.847737_g6749_i0 PRJNA1159911 7076 1288 5.847737 75.31885256 Anaerolineales bacterium 2073117 Bacteria Bacteria 87.8 1.77e-14   NR HND47413.1 2073117 g6749 i0 41.3 0.281832298136646 121 43 21.7 2 3 281 104 224 HND47413.1 Ty1/Copia family ribonuclease HI [Anaerolineales bacterium] diamond 363 87.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31747046 31747046 PRJNA1159911_P_NODE_78617_length_265_cov_1.875000_g78075_i0 PRJNA1159911 78617 265 1.875 4.96875 Chloroflexota bacterium 2026724 Bacteria Bacteria 52.8 4.84e-6   NR MEM8533101.1 2026724 g78075 i0 55 1.32452830188679 40 18 45.3 0 257 138 128 167 MEM8533101.1 hypothetical protein [Chloroflexota bacterium] diamond 351 52.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32589190 32589190 PRJNA1159911_P_NODE_91619_length_248_cov_0.880000_g91077_i0 PRJNA1159911 91619 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 80.5 3.89e-16   NR HXH66295.1 2952938 g91077 i0 89.7 2.85483870967742 39 4 47.2 0 2 118 207 245 HXH66295.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 708 81.3 0.990159901599016 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;