RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1159911" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1159911 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13062538 13062538 PRJNA1159911_P_NODE_98031_length_243_cov_0.905882_g97489_i0 PRJNA1159911 98031 243 0.905882 2.20129326 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 150 3.02e-41   NR MBY0277780.1 2838779 g97489 i0 92.6 1 81 6 100 0 1 243 234 314 MBY0277780.1 sigma-54 dependent transcriptional regulator [Candidatus Binatia bacterium] diamond 243 150 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
19433819 19433819 PRJNA1159911_P_NODE_4416_length_1695_cov_9.353884_g254_i6 PRJNA1159911 4416 1695 9.353884 158.5483338 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 549 4.0799999999999997e-190   NR HSR58777.1 2785449 g254 i6 86.9 1.08318584070796 313 41 55.4 0 981 43 94 406 HSR58777.1 IS3 family transposase [Candidatus Binataceae bacterium] diamond 1836 549 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
20710069 20710069 PRJNA1159911_P_NODE_87657_length_251_cov_0.865169_g87115_i0 PRJNA1159911 87657 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 134 3.5499999999999998e-34   NR MFN8603416.1 2838779 g87115 i0 82.9 0.9800796812749 82 14 98 0 4 249 624 705 MFN8603416.1 ATP-binding protein [Candidatus Binatia bacterium] diamond 246 134 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
23260659 23260659 PRJNA1159911_P_NODE_779_length_4345_cov_6.945693_g254_i4 PRJNA1159911 779 4345 6.945693 301.79036085 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 549 3.3e-179   NR HSR58777.1 2785449 g254 i4 86.9 0.422554660529344 313 41 21.6 0 4028 3090 94 406 HSR58777.1 IS3 family transposase [Candidatus Binataceae bacterium] diamond 1836 549 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28493244 28493244 PRJNA1159911_P_NODE_92427_length_247_cov_0.885057_g91885_i0 PRJNA1159911 92427 247 0.885057 2.18609079 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 91.7 5.58e-21   NR MFN8600253.1 2838779 g91885 i0 61.7 0.983805668016194 81 31 98.4 0 247 5 48 128 MFN8600253.1 PadR family transcriptional regulator [Candidatus Binatia bacterium] diamond 243 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29156443 29156443 PRJNA1159911_P_NODE_88849_length_250_cov_0.870056_g88307_i0 PRJNA1159911 88849 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 145 2.78e-39   NR MBY0275855.1 2838779 g88307 i0 98.6 0.852 71 1 85.2 0 215 3 1 71 MBY0275855.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Binatia bacterium] diamond 213 145 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;