RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1159911" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA1159911 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27388229 27388229 PRJNA1159911_P_NODE_53323_length_334_cov_0.865900_g52781_i0 PRJNA1159911 53323 334 0.8659 2.892106 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 179 1.47e-54   NR HEX4920614.1 3045160 g52781 i0 79.1 3.95209580838323 110 20 98.8 1 5 334 4 110 HEX4920614.1 HipA domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 1320 179 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30514311 30514311 PRJNA1159911_P_NODE_67853_length_289_cov_1.231481_g67311_i0 PRJNA1159911 67853 289 1.231481 3.55898009 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 91.7 4.08e-19   NR HYY72600.1 3045160 g67311 i0 53.1 4.02768166089965 96 45 99.7 0 288 1 139 234 HYY72600.1 IS1182 family transposase [Candidatus Bathyarchaeia archaeon] diamond 1164 91.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30640551 30640551 PRJNA1159911_P_NODE_74553_length_273_cov_2.310000_g74011_i0 PRJNA1159911 74553 273 2.31 6.3063 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 45.8 0.00159   NR MDH5200510.1 2026714 g74011 i0 44.2 0.923076923076923 43 24 47.3 0 271 143 99 141 MDH5200510.1 glycine cleavage system protein GcvH [Candidatus Bathyarchaeota archaeon] diamond 252 45.8 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;