RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1159911", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1159911 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18159704 18159704 PRJNA1159911_P_NODE_52835_length_336_cov_0.992395_g52293_i0 PRJNA1159911 52835 336 0.992395 3.3344472 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.032   NTclustered gi|690600972|emb|LN154683.1| 99802 g52293 i0 96.875 0.0952380952380952 32 0 9 1 141 171 1299 1268 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0139707 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
20709076 20709076 PRJNA1159911_P_NODE_3997_length_1780_cov_3.682484_g3795_i0 PRJNA1159911 3997 1780 3.682484 65.5482152 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 1770 0   NTclustered gi|1124902734|gb|AY812498.2| 6182 g3795 i0 99.187 107.839325842697 984 4 59 4 725 1707 1541 561 Schistosoma japonicum SJCHGC01615 protein mRNA, partial cds blastn 191954 1770 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31525844 31525844 PRJNA1159911_P_NODE_59296_length_313_cov_1.170833_g58754_i0 PRJNA1159911 59296 313 1.170833 3.66470729 Heterobilharzia americana 39320 Platyhelminthes Platyhelminthes 118 1.11e-29   NR CAH8484387.1 39320 g58754 i0 59.4 9 106 40 98.7 2 2 310 209 314 CAH8484387.1 unnamed protein product [Heterobilharzia americana] diamond 2817 119 0.991596638655462 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
31905242 31905242 PRJNA1159911_P_NODE_99737_length_242_cov_0.911243_g99195_i0 PRJNA1159911 99737 242 0.911243 2.20520806 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 60.5 5.92e-9   NR AAX25032.2 6182 g99195 i0 52.3 0.805785123966942 65 15 60.7 1 237 91 94 158 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 195 60.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;