RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1159911", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1159911 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7961075 7961075 PRJNA1159911_P_NODE_47327_length_359_cov_2.587413_g46785_i0 PRJNA1159911 47327 359 2.587413 9.28881267 Hirudo verbana 311461 Annelida Annelida 331 3.9e-86   NTclustered gi|2918369643|emb|OZ237784.1| 311461 g46785 i0 83.616 18.9610027855153 354 56 98 2 7 359 11669215 11668863 Hirudo verbana genome assembly, chromosome: 6 blastn 6807 331 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
11787278 11787278 PRJNA1159911_P_NODE_84870_length_254_cov_1.646409_g84328_i0 PRJNA1159911 84870 254 1.646409 4.18187886 Hirudo verbana 311461 Annelida Annelida 63.9 1.07e-5   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g84328 i0 95 7.03543307086614 40 2 16 0 5 44 15814878 15814917 Hirudo verbana genome assembly, chromosome: 1 blastn 1787 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
29724253 29724253 PRJNA1159911_P_NODE_90030_length_249_cov_0.875000_g89488_i0 PRJNA1159911 90030 249 0.875 2.17875 Helobdella robusta 6412 Annelida Annelida 73.2 7.55e-13   NR XP_009016376.1 6412 g89488 i0 42 3.80722891566265 81 46 97.6 1 248 6 295 374 XP_009016376.1 hypothetical protein HELRODRAFT_171411 [Helobdella robusta] diamond 948 73.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;