RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1159911", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1159911 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28366698 28366698 PRJNA1159911_P_NODE_87566_length_251_cov_0.865169_g87024_i0 PRJNA1159911 87566 251 0.865169 2.17157419 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 85.9 2.71e-17   NR MBX3119345.1 2682144 g87024 i0 62.1 0.788844621513944 66 22 75.3 1 189 1 7 72 MBX3119345.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 198 85.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30608997 30608997 PRJNA1159911_P_NODE_91273_length_248_cov_0.880000_g90731_i0 PRJNA1159911 91273 248 0.88 2.1824 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 99.8 3.5700000000000003e-22   NR MCW3101380.1 2739509 g90731 i0 53.7 1.95967741935484 82 38 99.2 0 247 2 902 983 MCW3101380.1 putative nucleotidyltransferase, Ribonuclease [Chthonomonadaceae bacterium] diamond 486 99.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;