RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1159911", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1159911 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2313155 2313155 PRJNA1159911_P_NODE_101442_length_241_cov_0.916667_g100900_i0 PRJNA1159911 101442 241 0.916667 2.20916747 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.3e-4   NTclustered gi|1145256367|ref|XM_012905716.2| 5854 g100900 i0 97.143 6.29460580912863 35 1 15 0 158 192 773 739 Plasmodium reichenowi SECIS-binding protein 2, putative partial mRNA blastn 1517 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
2859297 2859297 PRJNA1159911_P_NODE_76263_length_270_cov_1.472081_g75721_i0 PRJNA1159911 76263 270 1.472081 3.9746187 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 129 1.28e-36   NR BAN65408.1 5865 g75721 i0 73.6 15.4777777777778 87 23 96.7 0 2 262 3 89 BAN65408.1 40S ribosomal protein S5, putative [Babesia bovis] diamond 4179 130 0.992307692307692 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
24533803 24533803 PRJNA1159911_P_NODE_43700_length_379_cov_1.228758_g43158_i0 PRJNA1159911 43700 379 1.228758 4.65699282 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 65.8 4.64e-6   NTclustered gi|156102560|ref|XM_001616923.1| 5855 g43158 i0 100 1.07915567282322 35 0 9 0 236 270 422 388 Plasmodium vivax hypothetical protein, conserved (PVX_122050), partial mRNA blastn 409 65.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
28986311 28986311 PRJNA1159911_P_NODE_42468_length_386_cov_1.805112_g41926_i0 PRJNA1159911 42468 386 1.805112 6.96773232 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 85.9 1.08e-18   NR XP_013229976.1 5802 g41926 i0 64.5 10.7487046632124 62 22 48.2 0 385 200 44 105 XP_013229976.1 60S ribosomal protein L31, putative [Eimeria tenella] diamond 4149 86.3 0.995365005793743 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
30514312 30514312 PRJNA1159911_P_NODE_69933_length_284_cov_1.146919_g69391_i0 PRJNA1159911 69933 284 1.146919 3.2572499600000002 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.09e-4   NR UKK02333.1 68886 g69391 i0 54.1 0.390845070422535 37 17 39.1 0 284 174 172 208 UKK02333.1 60S ribosomal protein L10 [Theileria orientalis] diamond 111 50.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
32821608 32821608 PRJNA1159911_P_NODE_92520_length_247_cov_0.885057_g91978_i0 PRJNA1159911 92520 247 0.885057 2.18609079 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.3e-9   NR CAL7860154.1 1344799 g91978 i0 54.8 0.510121457489879 42 19 51 0 126 1 136 177 CAL7860154.1 unnamed protein product [Sarcocystis calchasi] diamond 126 63.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;