RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1159911", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 10 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 10 ✖

bioproject 1

  • PRJNA1159911 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
308174 308174 PRJNA1159911_P_NODE_62081_length_304_cov_1.779221_g61539_i0 PRJNA1159911 62081 304 1.779221 5.40883184 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 124 5.919999999999999e-24   NTclustered gi|2782925344|ref|XM_067072791.1| 252671 g61539 i0 91.209 1.53947368421053 91 8 31 0 69 159 3289 3199 PREDICTED: Clytia hemisphaerica protein transport protein Sec31A-like (LOC136816463), transcript variant X2, mRNA blastn 468 124 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
6685606 6685606 PRJNA1159911_P_NODE_39646_length_405_cov_1.710843_g39104_i0 PRJNA1159911 39646 405 1.710843 6.92891415 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.039   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g39104 i0 100 0.0691358024691358 28 0 7 0 228 255 7069975 7069948 Anemonia sulcata genome assembly, chromosome: 18 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
11786970 11786970 PRJNA1159911_P_NODE_70050_length_283_cov_2.414286_g69508_i0 PRJNA1159911 70050 283 2.414286 6.83242938 Eunicella cavolini 317547 Cnidaria other_Eukaryota 207 5.27e-49   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g69508 i0 82.627 6.50883392226148 236 39 83 2 11 245 198087 197853 Eunicella cavolini genome assembly, chromosome: 8 blastn 1842 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
28101847 28101847 PRJNA1159911_P_NODE_15385_length_783_cov_1.677465_g14905_i0 PRJNA1159911 15385 783 1.677465 13.13455095 root 1 Root_unresolved Root_unresolved 218 6.37e-63   NR KAJ7394266.1 174260 g14905 i0 54.2 8.38314176245211 214 88 82 2 759 118 387 590 KAJ7394266.1 NADP-dependent malic enzyme [Desmophyllum pertusum] diamond 6564 218 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
28133721 28133721 PRJNA1159911_P_NODE_51445_length_341_cov_2.324627_g50903_i0 PRJNA1159911 51445 341 2.324627 7.92697807 Metazoa 33208 Cnidaria other_Eukaryota 55.8 2.57e-6   NR XP_001626688.3 45351 g50903 i0 58.1 1.51319648093842 43 18 37.8 0 175 303 201 243 XP_001626688.3 cathepsin B [Nematostella vectensis] diamond 516 56.2 0.99288256227758 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
29680375 29680375 PRJNA1159911_P_NODE_75110_length_272_cov_1.949749_g74568_i0 PRJNA1159911 75110 272 1.949749 5.30331728 Metazoa 33208 Cnidaria other_Eukaryota 195 1.39e-59   NR XP_065663188.1 6087 g74568 i0 97.8 396.055147058824 90 2 99.3 0 272 3 97 186 XP_065663188.1 serine/threonine-protein phosphatase alpha-2 isoform [Hydra vulgaris] diamond 107727 196 0.994897959183674 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30091128 30091128 PRJNA1159911_P_NODE_102112_length_238_cov_2.266667_g101570_i0 PRJNA1159911 102112 238 2.266667 5.39466746 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.8 2.59e-22   NR XP_002163107.3 6087 g101570 i0 68 5.72268907563025 75 24 94.5 0 6 230 416 490 XP_002163107.3 T-complex protein 1 subunit beta [Hydra vulgaris] diamond 1362 100 0.998 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
31304260 31304260 PRJNA1159911_P_NODE_51155_length_342_cov_2.457249_g50613_i0 PRJNA1159911 51155 342 2.457249 8.40379158 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 65.9 1.89e-10   NR XP_046853964.1 2897299 g50613 i0 59.2 3.58771929824561 49 19 43 1 1 147 145 192 XP_046853964.1 probable phospholipid hydroperoxide glutathione peroxidase [Xenia sp. Carnegie-2017] diamond 1227 65.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
31513671 31513671 PRJNA1159911_P_NODE_71216_length_281_cov_1.009615_g70674_i0 PRJNA1159911 71216 281 1.009615 2.83701815 Metazoa 33208 Cnidaria other_Eukaryota 72.4 2.17e-12   NR XP_044180321.1 45264 g70674 i0 44.7 3.6085409252669 85 36 90.7 3 14 268 549 622 XP_044180321.1 uncharacterized protein LOC114977403 [Acropora millepora] diamond 1014 72.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
32538307 32538307 PRJNA1159911_P_NODE_67259_length_290_cov_1.589862_g66717_i0 PRJNA1159911 67259 290 1.589862 4.6105998 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 70.5 5.52e-12   NR KAK3753335.1 3060491 g66717 i0 42.3 1.5 104 43 95.2 4 276 1 39 137 KAK3753335.1 hypothetical protein QZH41_015270 [Actinostola sp. cb2023] diamond 435 70.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;