RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA1159911", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 21 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 21 ✖

bioproject 1

  • PRJNA1159911 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3588498 3588498 PRJNA1159911_P_NODE_74323_length_274_cov_1.482587_g73781_i0 PRJNA1159911 74323 274 1.482587 4.06228838 Anaeromyces robustus 1754192 Fungi Fungi 72 2.64e-12   NR ORX79130.1 1754192 g73781 i0 41 0.908759124087591 83 43 84.3 1 234 4 91 173 ORX79130.1 hypothetical protein BCR32DRAFT_38787 [Anaeromyces robustus] diamond 249 72 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Anaeromyces Anaeromyces robustus
7960497 7960497 PRJNA1159911_P_NODE_17767_length_709_cov_2.212264_g17263_i0 PRJNA1159911 17767 709 2.212264 15.68495176 Polychytrium aggregatum 110093 Fungi Fungi 516 2.09e-141   NTclustered gi|2432150950|ref|XM_053107694.1| 110093 g17263 i0 80.378 1.39492242595205 688 127 96 6 3 686 1600 2283 Polychytrium aggregatum elongation factor EF-3 (BJ171DRAFT_424968), partial mRNA blastn 989 516 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11786338 11786338 PRJNA1159911_P_NODE_38370_length_414_cov_3.228739_g37828_i0 PRJNA1159911 38370 414 3.228739 13.36697946 root 1 Root_unresolved Root_unresolved 163 1.5e-46   NR KAJ3103656.1 1352834 g37828 i0 75.7 3.98550724637681 103 25 74.6 0 106 414 19 121 KAJ3103656.1 Malate dehydrogenase, cytoplasmic [Phlyctochytrium bullatum] diamond 1650 164 0.99390243902439 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium bullatum
24533934 24533934 PRJNA1159911_P_NODE_50000_length_347_cov_1.682482_g49458_i0 PRJNA1159911 50000 347 1.682482 5.83821254 Chytridiales sp. JEL 2011832 Fungi Fungi 110 2.1999999999999997e-25   NR KAJ3414711.1 2786947 g49458 i0 50.4 5.04899135446686 117 53 99.4 2 345 1 418 531 KAJ3414711.1 T-complex protein 1 subunit theta [Chytridiales sp. JEL 0842] diamond 1752 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. JEL 0842
26723320 26723320 PRJNA1159911_P_NODE_45781_length_367_cov_2.258503_g45239_i0 PRJNA1159911 45781 367 2.258503 8.28870601 Gonapodya sp. JEL 2107737 Fungi Fungi 106 3.53e-24   NR KAJ3337232.1 2725673 g45239 i0 60.2 1.98637602179837 88 30 67.8 1 319 71 10 97 KAJ3337232.1 hypothetical protein HDU93_001422 [Gonapodya sp. JEL0774] diamond 729 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya sp. JEL0774
27122596 27122596 PRJNA1159911_P_NODE_97702_length_243_cov_1.358824_g97160_i0 PRJNA1159911 97702 243 1.358824 3.30194232 Chytridiomycetes 451435 Fungi Fungi 83.2 6.93e-17   NR KAJ3204768.1 109932 g97160 i0 53.6 5.06172839506173 69 32 85.2 0 207 1 1 69 KAJ3204768.1 ribosomal protein P0 (A0) (L10E) [Entophlyctis luteolus] diamond 1230 83.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
27388242 27388242 PRJNA1159911_P_NODE_89743_length_249_cov_0.875000_g89201_i0 PRJNA1159911 89743 249 0.875 2.17875 Obelidium mucronatum 110081 Fungi Fungi 111 3.15e-26   NR KAI9318278.1 110081 g89201 i0 61.3 2.89156626506024 80 31 96.4 0 248 9 1152 1231 KAI9318278.1 P-loop containing nucleoside triphosphate hydrolase protein, partial [Obelidium mucronatum] diamond 720 111 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Obelidium Obelidium mucronatum
28891169 28891169 PRJNA1159911_P_NODE_94848_length_245_cov_1.389535_g94306_i0 PRJNA1159911 94848 245 1.389535 3.40436075 Eukaryota 2759 Fungi Fungi 70.1 8.73e-12   NR KAJ3237501.1 4814 g94306 i0 67.4 4.50612244897959 46 15 56.3 0 243 106 548 593 KAJ3237501.1 Aspartate aminotransferase, cytoplasmic [Chytriomyces hyalinus] diamond 1104 70.5 0.994326241134752 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
28966905 28966905 PRJNA1159911_P_NODE_38768_length_411_cov_2.931953_g38226_i0 PRJNA1159911 38768 411 2.931953 12.05032683 Hyaloraphidium curvatum 82268 Fungi Fungi 69.3 5.31e-11   NR KAI9003817.1 82268 g38226 i0 39.8 0.715328467153285 98 57 70.8 2 411 121 165 261 KAI9003817.1 hypothetical protein DFJ74DRAFT_693807 [Hyaloraphidium curvatum] diamond 294 69.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29314096 29314096 PRJNA1159911_P_NODE_93789_length_246_cov_0.890173_g93247_i0 PRJNA1159911 93789 246 0.890173 2.18982558 Rhizophlyctis rosea 64517 Fungi Fungi 86.3 1.85e-17   NR KAJ3049351.1 64517 g93247 i0 51.3 3.68292682926829 78 38 95.1 0 13 246 204 281 KAJ3049351.1 hypothetical protein HK097_009641 [Rhizophlyctis rosea] diamond 906 86.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
29365056 29365056 PRJNA1159911_P_NODE_46909_length_361_cov_3.239583_g46367_i0 PRJNA1159911 46909 361 3.239583 11.69489463 Opisthokonta 33154 Fungi Fungi 48.1 6.48e-4   NR KAI9002974.1 82268 g46367 i0 90.5 0.831024930747922 21 2 17.5 0 50 112 82 102 KAI9002974.1 putative zinc-binding domain-containing protein [Hyaloraphidium curvatum] diamond 300 48.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29440045 29440045 PRJNA1159911_P_NODE_57830_length_317_cov_4.209016_g57288_i0 PRJNA1159911 57830 317 4.209016 13.34258072 Phlyctochytrium arcticum 1117335 Fungi Fungi 57.4 5.77e-7   NR KAI9102040.1 1117335 g57288 i0 46 1.19242902208202 63 34 59.6 0 201 13 31 93 KAI9102040.1 putative nucleosome assembly protein Nap1 [Phlyctochytrium arcticum] diamond 378 57.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium arcticum
29724247 29724247 PRJNA1159911_P_NODE_62870_length_302_cov_1.318777_g62328_i0 PRJNA1159911 62870 302 1.318777 3.98270654 Cladochytrium replicatum 109936 Fungi Fungi 70.9 2.28e-12   NR KAI8808789.1 109936 g62328 i0 56.1 0.566225165562914 57 24 56.6 1 6 176 52 107 KAI8808789.1 ankyrin repeat-containing domain protein [Cladochytrium replicatum] diamond 171 70.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
29901867 29901867 PRJNA1159911_P_NODE_62931_length_302_cov_1.008734_g62389_i0 PRJNA1159911 62931 302 1.008734 3.04637668 Chytridiomycota 4761 Fungi Fungi 84.7 1.34e-16   NR KAI9028491.1 82268 g62389 i0 48.1 3.09933774834437 77 40 76.5 0 5 235 446 522 KAI9028491.1 carbamoyl-phosphate synthase L chain, ATP binding domain-containing protein [Hyaloraphidium curvatum] diamond 936 84.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30533585 30533585 PRJNA1159911_P_NODE_66873_length_291_cov_1.481651_g66331_i0 PRJNA1159911 66873 291 1.481651 4.31160441 Eukaryota 2759 Fungi Fungi 82.8 5.96e-18   NR KAI8851852.1 64509 g66331 i0 51.3 5.68041237113402 78 38 80.4 0 55 288 7 84 KAI8851852.1 Prefoldin [Chytridium lagenaria] diamond 1653 83.6 0.990430622009569 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
31145773 31145773 PRJNA1159911_P_NODE_81435_length_260_cov_1.534759_g80893_i0 PRJNA1159911 81435 260 1.534759 3.9903734 Gaertneriomyces semiglobifer 109897 Fungi Fungi 50.8 3.69e-5   NR KAI9002296.1 109897 g80893 i0 51 0.588461538461538 51 25 58.8 0 258 106 152 202 KAI9002296.1 60S ribosomal protein L16 [Gaertneriomyces semiglobifer] diamond 153 50.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
31367779 31367779 PRJNA1159911_P_NODE_86116_length_252_cov_1.463687_g85574_i0 PRJNA1159911 86116 252 1.463687 3.68849124 Powellomyces hirtus 109895 Fungi Fungi 106 2.96e-26   NR KAI8922550.1 109895 g85574 i0 57.6 5.04761904761905 85 35 100 1 252 1 141 225 KAI8922550.1 uracil phosphoribosyltransferase-domain-containing protein [Powellomyces hirtus] diamond 1272 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
31841816 31841816 PRJNA1159911_P_NODE_101717_length_240_cov_2.287425_g101175_i0 PRJNA1159911 101717 240 2.287425 5.48982 Hyaloraphidium curvatum 82268 Fungi Fungi 68.6 5.08e-12   NR KAI9015985.1 82268 g101175 i0 59.5 1.05 42 17 52.5 0 239 114 146 187 KAI9015985.1 defective in cullin neddylation 1 [Hyaloraphidium curvatum] diamond 252 68.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32126961 32126961 PRJNA1159911_P_NODE_63858_length_299_cov_1.362832_g63316_i0 PRJNA1159911 63858 299 1.362832 4.07486768 Hyaloraphidium curvatum 82268 Fungi Fungi 135 7.8e-37   NR KAI9010688.1 82268 g63316 i0 63.2 1.89632107023411 95 35 95.3 0 285 1 59 153 KAI9010688.1 putative ribosome biogenesis protein C16orf42 [Hyaloraphidium curvatum] diamond 567 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32253648 32253648 PRJNA1159911_P_NODE_99678_length_242_cov_0.911243_g99136_i0 PRJNA1159911 99678 242 0.911243 2.20520806 Blyttiomyces sp. JEL 2750429 Fungi Fungi 75.5 9.34e-15   NR KAJ3332731.1 2724214 g99136 i0 48.1 2.03305785123967 81 40 99.2 2 240 1 46 125 KAJ3332731.1 hypothetical protein HDU76_013278 [Blyttiomyces sp. JEL0837] diamond 492 75.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces sp. JEL0837
32272904 32272904 PRJNA1159911_P_NODE_36678_length_428_cov_1.777465_g36136_i0 PRJNA1159911 36678 428 1.777465 7.6075502 Chytridiaceae 4812 Fungi Fungi 178 1.15e-48   NR KAJ3192915.1 109884 g36136 i0 61.5 8.67056074766355 135 45 94.6 1 23 427 825 952 KAJ3192915.1 hypothetical protein HK101_005754 [Irineochytrium annulatum] diamond 3711 179 0.994413407821229 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;