RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1159911", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1159911 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27767160 27767160 PRJNA1159911_P_NODE_46964_length_361_cov_2.100694_g46422_i0 PRJNA1159911 46964 361 2.100694 7.58350534 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 101 3.63e-24   NR MDR1988404.1 2053688 g46422 i0 48.2 0.914127423822715 110 57 91.4 0 356 27 55 164 MDR1988404.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 330 101 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
28619642 28619642 PRJNA1159911_P_NODE_76847_length_269_cov_1.244898_g76305_i0 PRJNA1159911 76847 269 1.244898 3.34877562 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 106 7.07e-27   NR USN59263.1 2053688 g76305 i0 74.6 1.58364312267658 71 18 79.2 0 268 56 85 155 USN59263.1 MAG: Flp pilus assembly complex ATPase component TadA [Candidatus Peribacteria bacterium] diamond 426 106 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
28777207 28777207 PRJNA1159911_P_NODE_47047_length_361_cov_1.281250_g46505_i0 PRJNA1159911 47047 361 1.28125 4.6253125 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 49.3 4.96e-4   NR MDR2411469.1 2053688 g46505 i0 52.1 0.739612188365651 48 23 39.9 0 214 357 2 49 MDR2411469.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 267 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
31683679 31683679 PRJNA1159911_P_NODE_24817_length_561_cov_1.993852_g24280_i0 PRJNA1159911 24817 561 1.993852 11.18550972 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 54.3 3.35e-5   NR USN58472.1 2053688 g24280 i0 39.7 0.417112299465241 78 47 41.7 0 257 24 129 206 USN58472.1 MAG: hypothetical protein H6767_09605 [Candidatus Peribacteria bacterium] diamond 234 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;