RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1159911", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1159911 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20710176 20710176 PRJNA1159911_P_NODE_92737_length_247_cov_0.885057_g92195_i0 PRJNA1159911 92737 247 0.885057 2.18609079 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 155 3.2199999999999993e-43   NR HXA82696.1 2072417 g92195 i0 92.6 5.90283400809717 81 6 98.4 0 3 245 81 161 HXA82696.1 CCA tRNA nucleotidyltransferase [Candidatus Methylomirabilota bacterium] diamond 1458 155 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28840374 28840374 PRJNA1159911_P_NODE_61868_length_305_cov_1.327586_g61326_i0 PRJNA1159911 61868 305 1.327586 4.0491373 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 160 2.5999999999999998e-46   NR HXA83184.1 2072417 g61326 i0 77 1.97704918032787 100 23 98.4 0 301 2 169 268 HXA83184.1 toast rack family protein [Candidatus Methylomirabilota bacterium] diamond 603 160 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30798566 30798566 PRJNA1159911_P_NODE_66454_length_292_cov_1.575342_g65912_i0 PRJNA1159911 66454 292 1.575342 4.59999864 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 64.7 1.05e-10   NR HTZ32687.1 2072417 g65912 i0 96.9 0.328767123287671 32 1 32.9 0 290 195 107 138 HTZ32687.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 96 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32840749 32840749 PRJNA1159911_P_NODE_93700_length_246_cov_0.890173_g93158_i0 PRJNA1159911 93700 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 154 9.8e-42   NR HXA82378.1 2072417 g93158 i0 89 2 82 9 100 0 246 1 522 603 HXA82378.1 alkaline phosphatase family protein [Candidatus Methylomirabilota bacterium] diamond 492 154 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;